Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq516988 163 1e-35 seq1174245 114 5e-21 seq516989 87.8 7e-13 >seq516988 Length=1185 Score = 163 bits (180), Expect = 1e-35 Identities = 184/245 (75%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 9202 TCCGTCTCGCGACGACCGATCGCTACAAGGACAAGGCGAGCGGCGAGTTCAAGGAAGTGA 9261 |||| | || || ||||| ||||||||||||||||||||||| || | ||||||| | Sbjct 1185 TCCGCGTGGCCACCACCGACCGCTACAAGGACAAGGCGAGCGGAGAAATGAAGGAAGCCA 1126 Query 9262 CCGAGTGGCACCGCGTCGCTTTCTTCGGCCGCCTCGCCGAGATCGTCGACGAGCACCTTC 9321 | |||||||||||| |||| |||||||||||| | || || || | || ||| |||| Sbjct 1125 CGGAGTGGCACCGCATCGCCTTCTTCGGCCGCTTGGCAGAAATTGCCGGCGAATACCTGA 1066 Query 9322 GCAAGGGCGCATCGGTCTACATCGAGGGGCGCATCAAGACGCGGAAGTGGCAGGATCAAT 9381 ||||| | ||||||||||||||||| | ||||| || ||||| || | | Sbjct 1065 AGAAGGGTTCGTCGGTCTACATCGAGGGCAAGCTGAAGACTCGCCAGTGGGAGAAGGA-- 1008 Query 9382 CCGGCCAGGATCGCTACACGACCGAGATCGTCGCCGACAGGATGCAGATGCTCGGA---A 9438 |||||| | | |||| |||||||||||||| ||| |||||||||||| ||| | Sbjct 1007 -TGGCCAGAAACAGTACAGCACCGAGATCGTCGCAGACCAGATGCAGATGCTGGGAGGCA 949 Query 9439 AGCCG 9443 ||||| Sbjct 948 AGCCG 944 >seq1174245 Length=209 Score = 114 bits (126), Expect = 5e-21 Identities = 147/197 (75%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 3031 CAAGATCATCGCCTTCGCGATCTTCTCGACGCGGCGCCAGGAGGAGATCACGGCGATCCG 3090 |||| | ||||||||||| |||||||| || || |||||||||||||||||| |||||| Sbjct 193 CAAGGTGATCGCCTTCGCCATCTTCTCAACCCGCCGCCAGGAGGAGATCACGCGGATCCG 134 Query 3091 CTGGGAGGACCTGACCGAG-GGGGAGAGCACGCAGCTCGTGCGCGACGTGAAGCACCCGC 3149 |||||| ||||| |||| | | || || ||| ||||||||| ||||| |||| Sbjct 133 CTGGGACGACCTAGACGAGCGCCGCCAG-GCGGTGCTGGTGCGCGACATGAAGAACCCCG 75 Query 3150 GCAAGAAGATCGGCAACAATCAGGAATCGCGCCTCACACCGGAAG-CGCT--GGCGATCA 3206 | |||||||||| ||| || | | | ||| | ||||| | ||| ||||||| Sbjct 74 GACAGAAGATCGGTAAC---CACGTCTGGTGCCACCTCCCGGACGAGGCTTGGGCGATCC 18 Query 3207 TCCGCTCGATGCCGCGC 3223 | | |||||||||||| Sbjct 17 TGCAGTCGATGCCGCGC 1 >seq516989 Length=1305 Score = 87.8 bits (96), Expect = 7e-13 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 9111 ATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAAC 9166 |||||||||||||||||||||||| |||||||||||||||||||||| || ||||| Sbjct 57 ATGGCATCCGTCAACAAAGTCATCATCGTCGGCAATCTCGGCGCCGATCCAGAAAC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197237956968808