Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_012743.2
Length=62715
Score E
Sequences producing significant alignments: (Bits) Value
seq516988 163 1e-35
seq1174245 114 5e-21
seq516989 87.8 7e-13
>seq516988
Length=1185
Score = 163 bits (180), Expect = 1e-35
Identities = 184/245 (75%), Gaps = 6/245 (2%)
Strand=Plus/Minus
Query 9202 TCCGTCTCGCGACGACCGATCGCTACAAGGACAAGGCGAGCGGCGAGTTCAAGGAAGTGA 9261
|||| | || || ||||| ||||||||||||||||||||||| || | ||||||| |
Sbjct 1185 TCCGCGTGGCCACCACCGACCGCTACAAGGACAAGGCGAGCGGAGAAATGAAGGAAGCCA 1126
Query 9262 CCGAGTGGCACCGCGTCGCTTTCTTCGGCCGCCTCGCCGAGATCGTCGACGAGCACCTTC 9321
| |||||||||||| |||| |||||||||||| | || || || | || ||| ||||
Sbjct 1125 CGGAGTGGCACCGCATCGCCTTCTTCGGCCGCTTGGCAGAAATTGCCGGCGAATACCTGA 1066
Query 9322 GCAAGGGCGCATCGGTCTACATCGAGGGGCGCATCAAGACGCGGAAGTGGCAGGATCAAT 9381
||||| | ||||||||||||||||| | ||||| || ||||| || | |
Sbjct 1065 AGAAGGGTTCGTCGGTCTACATCGAGGGCAAGCTGAAGACTCGCCAGTGGGAGAAGGA-- 1008
Query 9382 CCGGCCAGGATCGCTACACGACCGAGATCGTCGCCGACAGGATGCAGATGCTCGGA---A 9438
|||||| | | |||| |||||||||||||| ||| |||||||||||| ||| |
Sbjct 1007 -TGGCCAGAAACAGTACAGCACCGAGATCGTCGCAGACCAGATGCAGATGCTGGGAGGCA 949
Query 9439 AGCCG 9443
|||||
Sbjct 948 AGCCG 944
>seq1174245
Length=209
Score = 114 bits (126), Expect = 5e-21
Identities = 147/197 (75%), Gaps = 8/197 (4%)
Strand=Plus/Minus
Query 3031 CAAGATCATCGCCTTCGCGATCTTCTCGACGCGGCGCCAGGAGGAGATCACGGCGATCCG 3090
|||| | ||||||||||| |||||||| || || |||||||||||||||||| ||||||
Sbjct 193 CAAGGTGATCGCCTTCGCCATCTTCTCAACCCGCCGCCAGGAGGAGATCACGCGGATCCG 134
Query 3091 CTGGGAGGACCTGACCGAG-GGGGAGAGCACGCAGCTCGTGCGCGACGTGAAGCACCCGC 3149
|||||| ||||| |||| | | || || ||| ||||||||| ||||| ||||
Sbjct 133 CTGGGACGACCTAGACGAGCGCCGCCAG-GCGGTGCTGGTGCGCGACATGAAGAACCCCG 75
Query 3150 GCAAGAAGATCGGCAACAATCAGGAATCGCGCCTCACACCGGAAG-CGCT--GGCGATCA 3206
| |||||||||| ||| || | | | ||| | ||||| | ||| |||||||
Sbjct 74 GACAGAAGATCGGTAAC---CACGTCTGGTGCCACCTCCCGGACGAGGCTTGGGCGATCC 18
Query 3207 TCCGCTCGATGCCGCGC 3223
| | ||||||||||||
Sbjct 17 TGCAGTCGATGCCGCGC 1
>seq516989
Length=1305
Score = 87.8 bits (96), Expect = 7e-13
Identities = 53/56 (95%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 9111 ATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAAC 9166
|||||||||||||||||||||||| |||||||||||||||||||||| || |||||
Sbjct 57 ATGGCATCCGTCAACAAAGTCATCATCGTCGGCAATCTCGGCGCCGATCCAGAAAC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 197237956968808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |