Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq638214 125 9e-24
seq791531 93.3 5e-14
seq1359195 82.4 9e-11
seq13652 82.4 9e-11
>seq638214
Length=1998
Score = 125 bits (138), Expect = 9e-24
Identities = 115/139 (83%), Gaps = 5/139 (4%)
Strand=Plus/Plus
Query 140594 AGGCGAGACA-ACCTGGTTGCGGGAAGTTCCTTAGAGCTCTAAC-TACCACCCCCATTTG 140651
|||| | ||| |||| |||||||||| ||||||||| ||||| ||||||| ||||||
Sbjct 1257 AGGCAATACACACCTTGTTGCGGGAAACCCCTTAGAGC-CTAACCTACCACCTTCATTTG 1315
Query 140652 GAAACTTTTGGGGGGATCTCGGTTAATTACCGAACCCGATGGTAA-AAAGGTTAGAGATT 140710
||||||| ||| |||| ||||| |||| ||||||| | ||||||| || |||||| ||||
Sbjct 1316 GAAACTTATGGAGGGAACTCGGGTAATGACCGAACACAATGGTAATAACGGTTAG-GATT 1374
Query 140711 GGATAATCCGCAGGCGAGA 140729
|| |||||||||||| ||
Sbjct 1375 GGGCAATCCGCAGGCGCGA 1393
>seq791531
Length=8839
Score = 93.3 bits (102), Expect = 5e-14
Identities = 142/200 (71%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 127539 CCTCGTCACGGGAGATGAGTTCATT-CGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597
|||| || | || || |||||||| | | | | | ||||||||||| | ||| | ||||
Sbjct 7339 CCTCATCTCTTGAAATAAGTTCATTGCTAAATGTA-AGACCTGGCATTAAACCTCTCTTC 7281
Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657
|| | ||||||||| || ||| |||||||||||| || || |||||| || ||
Sbjct 7280 TTAAGCCAGAAAATAGCTGCAAAACTGCCAGAGAAGAATATGCCTTCCACAGCAGCAAAT 7221
Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCCCACTGT 127717
|||| || |||||| ||||| | | || | | ||| |||| | | ||||| |
Sbjct 7220 GCAATTACACGCTCTGCAAATGTGGCAGATTCATCAGCAATCCACCTGAGTGCCCAGTCA 7161
Query 127718 GCCTTTTTCTCGATACATGG 127737
|||||||||| | ||||||
Sbjct 7160 GCCTTTTTCTTTACACATGG 7141
>seq1359195
Length=732
Score = 82.4 bits (90), Expect = 9e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 175901 GTGAAGATGTACCTCGTTTGAGACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGA 175960
||||||||||| |||| | || || || ||||| ||||||| || || || |||
Sbjct 706 GTGAAGATGTATCTCGGGCTGGCCGAGTCCTTCCCACCGCTGAGACGTGTGCCGAACTGA 647
Query 175961 CCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACA 176020
|| |||| || | |||||| ||||| ||||| | ||| | |||| |||| |
Sbjct 646 CCGATGGGCTGCAGCACATTGATGTTGTTGCTGCCCACAAAGTTCTGAGCCAGGTTGATA 587
Query 176021 ATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCC 176080
|| || | ||| || ||||||||| ||||| ||||| | || ||||| | |
Sbjct 586 ATTGTCGACATGAGTGACTGTTCACCGTGGTGGTACGCCGAGTGTTCGGCCACGGAGCCT 527
Query 176081 GCCAACTGCGCCACCTTCATCTC 176103
|||||||| || || |||| |||
Sbjct 526 GCCAACTGGGCAACTTTCACCTC 504
>seq13652
Length=6622
Score = 82.4 bits (90), Expect = 9e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 175901 GTGAAGATGTACCTCGTTTGAGACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGA 175960
||||||||||| |||| | || || || ||||| ||||||| || || || |||
Sbjct 2807 GTGAAGATGTATCTCGGGCTGGCCGAGTCCTTCCCACCGCTGAGACGTGTGCCGAACTGA 2748
Query 175961 CCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACA 176020
|| |||| || | |||||| ||||| ||||| | ||| | |||| |||| |
Sbjct 2747 CCGATGGGCTGCAGCACATTGATGTTGTTGCTGCCCACAAAGTTCTGAGCCAGGTTGATA 2688
Query 176021 ATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCC 176080
|| || | ||| || ||||||||| ||||| ||||| | || ||||| | |
Sbjct 2687 ATTGTCGACATGAGTGACTGTTCACCGTGGTGGTACGCCGAGTGTTCGGCCACGGAGCCT 2628
Query 176081 GCCAACTGCGCCACCTTCATCTC 176103
|||||||| || || |||| |||
Sbjct 2627 GCCAACTGGGCAACTTTCACCTC 2605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 602790057450720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |