Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq741633 104 3e-17
>seq741633
Length=11487
Score = 104 bits (114), Expect = 3e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||||| || | |||||||||||| | || ||||| || |||||||| || ||
Sbjct 8866 CCTCCTCGCAACCTCAACACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCAGAC 8807
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|||||||| | || || |||||||| || || || || | || |||||||| | ||
Sbjct 8806 AGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATGAGACGTTGCTGGTCTGGTGGA 8747
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | || |||||| |||||| ||| | | | | ||||| | ||||||
Sbjct 8746 ATTCCTTCTTTGTCCTGGATCTTTGCCTTCACATTTTCAATTGTGTCTGAAGCTTCCACT 8687
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| |||||||| ||||| || || || || ||||| || |||||
Sbjct 8686 TCCAGTGTGATGGTCTTGCCTGTGAGGGTCTTTACAAAAATCTGCAT 8640
Score = 102 bits (112), Expect = 9e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||||||||| | | || ||||| ||| | |||| || || |||||||||||||| |
Sbjct 9324 TGCCTCCTCTGAGCCTCAGCACCAAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTG 9265
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| |||||||| | || || || || ||||| || || ||||| | ||||||||| | |
Sbjct 9264 AAAGAGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTG 9205
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTC-TTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543
| | || ||||| | | ||| || | | || | || | | ||||| | |||
Sbjct 9204 GGATGCCTTCCTTAT-CTTGAATTTTTGCTTTTACATTCTCAATAGTGTCAGATGCTTCA 9146
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | || |||||||| || || || ||||| ||||| || |||||
Sbjct 9145 ACCTCTAATGTTATGGTTTTCCCTGTAAGAGTTTTTACAAAAATCTGCAT 9096
Score = 102 bits (112), Expect = 9e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| |||| || | | |||||||||||| || ||| || || ||||||||||| |
Sbjct 10008 TGCCACCTCGCAACCTTAGCACCAGATGCAAAGTGGACTCTTTCTGAATATTGTAGTCAG 9949
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
|||| || || | || || ||||||||||| || || || | || |||||||| | |
Sbjct 9948 ATAGGGTCCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCTGGAG 9889
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | | || || ||| ||||||| || | | | | ||||| | |||||
Sbjct 9888 GAATACCTTCTTTATCCTGGATCTTCGCTTTCACATTTTCGATGGTGTCTGAAGCTTCCA 9829
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| |||| || |||||||| || || || || || |||||||| |||||
Sbjct 9828 CTTCCAGGGTAATGGTTTTTCCAGTAAGTGTCTTCACAAAGATCTGCAT 9780
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||||||||||| ||| ||||| || || ||||| || || || ||||| | || ||
Sbjct 11129 CACCAGATGCAGAGTAGATTCCTTCTGAATGTTGTAATCTGACAGGGTGCGTCCATCTTC 11070
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
||||||||||| || || || | || ||||| || | || | | || ||||||
Sbjct 11069 AAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCTGGAGGAATCCCTTCTTTGTCCTG 11010
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||||| ||| | || | | ||||| || ||||| |||| || ||||||||
Sbjct 11009 GATCTTCGCCTTCACATTCTCAATGGTGTCCGACGCCTCCACTTCCAAGGTAATGGTTTT 10950
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || || ||||| |||||
Sbjct 10949 TCCAGTAAGGGTCTTCACGAAGATCTGCAT 10920
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
|| |||||||||||| ||| ||||| || || ||||| || || || || || | ||
Sbjct 9764 CAGCACCAGATGCAAAGTAGATTCCTTCTGAATGTTGTAATCCGACAGGGTTCGTCCATC 9705
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| || ||||| || || || || | ||||||||||| | || | || ||||||||
Sbjct 9704 TTCCAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTC 9645
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560
| |||||| ||| | | | | ||||| | ||| || |||| || || ||
Sbjct 9644 CTGGATCTTTGCCTTCACATTTTCAATAGTGTCTGAAGCTTCTACCTCCAGGGTAATTGT 9585
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| || || || || ||||| || |||||
Sbjct 9584 CTTGCCAGTAAGGGTCTTCACAAAAATCTGCAT 9552
Score = 82.4 bits (90), Expect = 8e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
||| ||||| |||| ||| ||||| || |||||||| || |||||||| | | | ||
Sbjct 8339 CAATACCAGGTGCAGGGTAGATTCCTTCTGAATATTGTAATCAGATAGAGTTCTCCCATC 8280
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
||||| || ||||| || || |||| | |||||| || | || | | ||||| ||
Sbjct 8279 TTCGAGTTGTTTGCCAGCAAAAATCAGTCTCTGCTGATCAGGTGGGATCCCTTCCTTATC 8220
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560
| || ||| ||| | || | | || || | || || |||| ||||||||
Sbjct 8219 CTGAATTTTCGCCTTCACATTCTCAATTGTATCAGATGCCTCTACTTCCAATGTGATGGT 8160
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || || || ||||| || || |||||
Sbjct 8159 TTTACCAGTTAGTGTCTTAACGAATATCTGCAT 8127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 555364448223840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |