Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq741633 104 3e-17 >seq741633 Length=11487 Score = 104 bits (114), Expect = 3e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| || | |||||||||||| | || ||||| || |||||||| || || Sbjct 8866 CCTCCTCGCAACCTCAACACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCAGAC 8807 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 |||||||| | || || |||||||| || || || || | || |||||||| | || Sbjct 8806 AGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATGAGACGTTGCTGGTCTGGTGGA 8747 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | || |||||| |||||| ||| | | | | ||||| | |||||| Sbjct 8746 ATTCCTTCTTTGTCCTGGATCTTTGCCTTCACATTTTCAATTGTGTCTGAAGCTTCCACT 8687 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| ||||| || || || || ||||| || ||||| Sbjct 8686 TCCAGTGTGATGGTCTTGCCTGTGAGGGTCTTTACAAAAATCTGCAT 8640 Score = 102 bits (112), Expect = 9e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||||||||| | | || ||||| ||| | |||| || || |||||||||||||| | Sbjct 9324 TGCCTCCTCTGAGCCTCAGCACCAAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTG 9265 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | |||||||| | || || || || ||||| || || ||||| | ||||||||| | | Sbjct 9264 AAAGAGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTG 9205 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTC-TTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543 | | || ||||| | | ||| || | | || | || | | ||||| | ||| Sbjct 9204 GGATGCCTTCCTTAT-CTTGAATTTTTGCTTTTACATTCTCAATAGTGTCAGATGCTTCA 9146 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | || |||||||| || || || ||||| ||||| || ||||| Sbjct 9145 ACCTCTAATGTTATGGTTTTCCCTGTAAGAGTTTTTACAAAAATCTGCAT 9096 Score = 102 bits (112), Expect = 9e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| |||| || | | |||||||||||| || ||| || || ||||||||||| | Sbjct 10008 TGCCACCTCGCAACCTTAGCACCAGATGCAAAGTGGACTCTTTCTGAATATTGTAGTCAG 9949 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 |||| || || | || || ||||||||||| || || || | || |||||||| | | Sbjct 9948 ATAGGGTCCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCTGGAG 9889 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | || || ||| ||||||| || | | | | ||||| | ||||| Sbjct 9888 GAATACCTTCTTTATCCTGGATCTTCGCTTTCACATTTTCGATGGTGTCTGAAGCTTCCA 9829 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| || |||||||| || || || || || |||||||| ||||| Sbjct 9828 CTTCCAGGGTAATGGTTTTTCCAGTAAGTGTCTTCACAAAGATCTGCAT 9780 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||||||||| ||| ||||| || || ||||| || || || ||||| | || || Sbjct 11129 CACCAGATGCAGAGTAGATTCCTTCTGAATGTTGTAATCTGACAGGGTGCGTCCATCTTC 11070 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| || || || | || ||||| || | || | | || |||||| Sbjct 11069 AAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCTGGAGGAATCCCTTCTTTGTCCTG 11010 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||||| ||| | || | | ||||| || ||||| |||| || |||||||| Sbjct 11009 GATCTTCGCCTTCACATTCTCAATGGTGTCCGACGCCTCCACTTCCAAGGTAATGGTTTT 10950 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || ||||| ||||| Sbjct 10949 TCCAGTAAGGGTCTTCACGAAGATCTGCAT 10920 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 || |||||||||||| ||| ||||| || || ||||| || || || || || | || Sbjct 9764 CAGCACCAGATGCAAAGTAGATTCCTTCTGAATGTTGTAATCCGACAGGGTTCGTCCATC 9705 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || || ||||| || || || || | ||||||||||| | || | || |||||||| Sbjct 9704 TTCCAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTC 9645 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560 | |||||| ||| | | | | ||||| | ||| || |||| || || || Sbjct 9644 CTGGATCTTTGCCTTCACATTTTCAATAGTGTCTGAAGCTTCTACCTCCAGGGTAATTGT 9585 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || ||||| || ||||| Sbjct 9584 CTTGCCAGTAAGGGTCTTCACAAAAATCTGCAT 9552 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 ||| ||||| |||| ||| ||||| || |||||||| || |||||||| | | | || Sbjct 8339 CAATACCAGGTGCAGGGTAGATTCCTTCTGAATATTGTAATCAGATAGAGTTCTCCCATC 8280 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 ||||| || ||||| || || |||| | |||||| || | || | | ||||| || Sbjct 8279 TTCGAGTTGTTTGCCAGCAAAAATCAGTCTCTGCTGATCAGGTGGGATCCCTTCCTTATC 8220 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560 | || ||| ||| | || | | || || | || || |||| |||||||| Sbjct 8219 CTGAATTTTCGCCTTCACATTCTCAATTGTATCAGATGCCTCTACTTCCAATGTGATGGT 8160 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || || ||||| || || ||||| Sbjct 8159 TTTACCAGTTAGTGTCTTAACGAATATCTGCAT 8127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555364448223840