Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq302911 118 7e-22
seq741633 109 4e-19
seq302910 102 6e-17
seq708045 82.4 5e-11
>seq302911
Length=9965
Score = 118 bits (130), Expect = 7e-22
Identities = 142/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 39530 CTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAA 39589
|||||||||| || ||||| | |||| ||| |||| |||| ||||| || |||| |
Sbjct 1226 CTTTTTGTATGTTGTAATCTGACAAAGTGCGACCATCTTCCAGCTGTTTGCCAGCAAATA 1285
Query 39590 TTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG 39649
| | |||||||||||| | || | ||||||||||| || ||| ||||| |
Sbjct 1286 TCAGACGCTGCTGATCAGGTGGAATACCTTCTTTGTCTTGAATCTTTGCTTTAACATTTT 1345
Query 39650 CTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGA 39709
| | ||| |||| ||| || ||||| || ||||| || |||||||| || || ||||
Sbjct 1346 CAATTGTATCTGAAGGTTCAACTTCCAATGTTATTGTCTTCCCCGTTAATGTCTTCACGA 1405
Query 39710 AGATCTGCATGTC 39722
|||||||||||||
Sbjct 1406 AGATCTGCATGTC 1418
>seq741633
Length=11487
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||||||| | ||| |||| |||||||||| |||||| || || || ||||| | |
Sbjct 9550 CCACCTCGCAATCTCAGCACCAGATGCAAAGTGGATTCTTTCTGAATGTTGTAATCAGAC 9491
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| ||| |||| |||| ||| || || |||| |||| | ||| || || | |||
Sbjct 9490 AGGGTACGTCCATCTTCCAGTTGCTTGCCTGCAAAGATTAGCCTCTGTTGGTCAGGTGGT 9431
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||| || || |||||| |||| || | | ||| |||| ||| ||
Sbjct 9430 ATTCCTTCCTTATCCTGAATTTTTGCCTTAACATTCTCAATTGTATCTGAAGCTTCAACA 9371
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|||||||| || || || ||||| || || || || ||||||||||||
Sbjct 9370 TCCAAAGTTATAGTCTTGCCCGTCAATGTCTTCACAAAGATCTGCATG 9323
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || ||||| | ||| || | ||||| ||| ||| || || ||||||||||| | |
Sbjct 10234 CCACCACGCAACCTCAGGACAAGATGCAGAGTAGATTCCTTCTGAATATTATAATCAGAC 10175
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| || |||| |||| || || || |||| || || | |||||| || | ||
Sbjct 10174 AAGGTCCGCCCATCTTCCAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGCGGA 10115
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||||||| || || || ||| | || ||| || || | ||| ||
Sbjct 10114 ATGCCTTCTTTATCCTGGATCTTCGCTTTTACATTCTCTATGGTATCGGATGCTTCTACT 10055
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| || ||||| ||||| || || || ||||| || || |||||||||
Sbjct 10054 TCTAATGTAATAGTTTTTCCAGTCAAGGTTTTCACAAATATCTGCATG 10007
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| || ||||| | || |||| ||||| ||| ||| || || || || ||||| |
Sbjct 11147 GCCACCGCGCAACCTTAGCACCAGATGCAGAGTAGATTCCTTCTGAATGTTGTAATCTGA 11088
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
|| |||| |||| || | || || || |||| || | ||| |||||||| | ||
Sbjct 11087 CAGGGTGCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCTGGAGG 11028
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTG-CGCTTTCCA 39670
| ||||||||||| || || || | || | | ||||| | ||| ||||
Sbjct 11027 AATCCCTTCTTTGTCCTGGATCTTCGCCTTCACATTCTCAATGGTGTCCGACGC-CTCCA 10969
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| ||||| ||||| ||||| || || | || || ||||||||||||||
Sbjct 10968 CTTCCAAGGTAATGGTTTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 10920
>seq302910
Length=12142
Score = 102 bits (112), Expect = 6e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 39530 CTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAA 39589
|||||||||| || ||||| | | | | | |||| || | |||||| || |||| |
Sbjct 11150 CTTTTTGTATGTTGTAATCTGAGAGAGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAGA 11209
Query 39590 TTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG 39649
|||| ||||| ||||| | |||| ||||||||||| |||||| ||| | |
Sbjct 11210 TTAATCGCTGTTGATCTGGCGGTATTCCTTCTTTGTCTTGAATTTTTGCTTTTACATTTT 11269
Query 39650 CTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGA 39709
| | |||||||| || || ||||| || |||||||| || || | ||||||||| |
Sbjct 11270 CAATTGTGTCTGATGGCTCAACTTCCAATGTTATTGTTTTCCCTGTCAGAGTTTTTACAA 11329
Query 39710 AGATCTGCATG 39720
| |||||||||
Sbjct 11330 AAATCTGCATG 11340
Score = 82.4 bits (90), Expect = 5e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567
|| |||||||| || ||| ||||| || ||||| || || | ||| || ||||
Sbjct 3981 AGAACCAAATGTAATGTGGACTCTTTCTGAATATTGTAGTCAGATAAAGTACGCCCATCT 4040
Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627
||||||||||| || ||||||| | | |||||| || | || | |||||||||||
Sbjct 4041 TCCAATTGTTTTCCAGCAAAAATAAGCCTCTGCTGGTCTGGTGGAATTCCTTCTTTGTCT 4100
Query 39628 CATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTT 39687
||||| || | | | | || |||| ||| || |||| || ||||||
Sbjct 4101 TGGATTTTGGCCTTCACATTTTCAATAGTATCTGATGGTTCAACTTCCAGTGTTATTGTT 4160
Query 39688 TTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
||||| ||||| || || || || || ||||||
Sbjct 4161 TTACCTGTTAATGTCTTGACAAAAATTTGCATG 4193
>seq708045
Length=25632
Score = 82.4 bits (90), Expect = 5e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 39517 TGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGT 39576
|| ||||| |||||| || ||||||||||| | ||| || |||| ||||| ||
Sbjct 10593 TGTAAAGTAGATTCTTTCTGGATATTATAATCAGACAATGTTCGGCCATCTTCCAACTGC 10534
Query 39577 TTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTT 39636
|| || |||| || | | ||||||||||| ||| | |||||||| || |||||
Sbjct 10533 TTGCCAGCAAATATCAGTCTCTGCTGATCCGGGGGAATTCCTTCTTTATCCTGGATTTTG 10474
Query 39637 TGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTT 39696
||||| | | | ||| || | ||| || || || || || || || |||||
Sbjct 10473 GCTTTAACATTTTCAATTGTATCCGAAGCTTCTACCTCTAAGGTGATAGTCTTCCCCGTC 10414
Query 39697 AAAGTTTTTACGAAGATCTGCAT 39719
||||| || || || ||||||||
Sbjct 10413 AAAGTCTTCACAAATATCTGCAT 10391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 341453223986036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |