Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq784716 118 1e-21 >seq784716 Length=46480 Score = 118 bits (130), Expect = 1e-21 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 154955 TCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGA 155014 |||||||||| | |||||||||||| | |||||||| || || | | ||| |||| Sbjct 12519 TCAGGTATATTTGGATGGAGCAAATATGAATGCACAAGTTGGTTTGTGCAGACCTGGTGA 12460 Query 155015 GTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGG 155074 |||||| | || || | ||||| ||||| ||||||||||| || || || |||||||| Sbjct 12459 TTATGGTTCTGACGTTTCACATCTGAACTTGCATAAAACATTTTGCATACCTCATGGAGG 12400 Query 155075 TGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||| ||||| || | ||||||||||| || Sbjct 12399 TGGTGGTCCAGGAATGGGTCCTATAGGCGT 12370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569094734321280