Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq791531 123 3e-23
seq599987 122 1e-22
>seq791531
Length=8839
Score = 123 bits (136), Expect = 3e-23
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 19216 TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTT 19275
||| | | ||| |||| |||| ||| || | | ||| ||||| || ||||| | |||
Sbjct 7015 TCAGCAGAATCCTTAATGTATGTATCAATGAGAAGACTATACATCTCAGAATGCACATTC 6956
Query 19276 TCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAA 19335
|| ||||| || || || || || |||||||||||||| |||| || ||||| ||
Sbjct 6955 TCCATAGCAATTTGGAAGCCATAGAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTG 6896
Query 19336 AATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACA 19395
|| ||||| |||| ||||| ||||| || ||||||||||| || || || |||| |||
Sbjct 6895 AACCTTTCAACCAGGTTTTCGTTAACAATGCCATCACTAGCAGCGAAGAAAGCTAGAACA 6836
Query 19396 TGTTTAATAAAATGTTTTTCATCTGAGGTT 19425
|| ||| ||||| |||| || |||||
Sbjct 6835 TGGGAAATGAAATGCCTTTCTTC--AGGTT 6808
Score = 118 bits (130), Expect = 1e-21
Identities = 160/223 (72%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042
|||| ||||| || | |||||| |||||| | ||| ||||| | ||||| || |
Sbjct 7339 CCTCATCTCTTGAAATAAGTTCATTGCTAAATGTAAGACCTGGCATTAAACCTCTCTTCT 7280
Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102
| | |||||| |||| ||||| ||||| |||||||| ||||| || || ||||| |
Sbjct 7279 TAAGCCAGAAAATAGCTGCAAAACTGCCAGAGAAGAATATGCCTTCCACAGCAGCAAATG 7220
Query 19103 CAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAG 19162
||| || | ||| || | | ||| | || | |||||| | |||||||| ||||
Sbjct 7219 CAATTACACGCTCTGCAAATGTGGCAGATTCATCAGCAATCCACCTGAGTGCCCAGTCAG 7160
Query 19163 CCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAG 19205
|||| || ||||||||||||| || || |||| ||| || ||
Sbjct 7159 CCTTTTTCTTTACACATGGCAAAGTTTCAATAGCATTGAAGAG 7117
Score = 107 bits (118), Expect = 2e-18
Identities = 100/127 (79%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 19450 TTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTC 19509
|| |||||||||||||||||| | ||||| ||||| || ||||||||||||||||| |
Sbjct 6576 TTCGATAAATCTACTTCTTCAGCCGTCCAGAAAGACGCTTCTGCTTTTTTATACATAGCC 6517
Query 19510 CATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTAAGAATA 19569
|| |||||| |||| || || || || || |||||||| || || ||| | || | |
Sbjct 6516 CAAATATCATGATACTGAATTGGGAAAATGACAAATCTTCTTGGGTTCTCTCTCAGTAGA 6457
Query 19570 GGTTCCA 19576
|||||||
Sbjct 6456 GGTTCCA 6450
Score = 91.5 bits (100), Expect = 2e-13
Identities = 145/202 (72%), Gaps = 6/202 (3%)
Strand=Plus/Minus
Query 18787 AGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATT 18846
|| |||||||| || ||||||| ||||||| | ||||| | |||||| ||||| |||||
Sbjct 7608 AGAAGTCTATCAGCAACAAATTCAATATATTTCTTCATAAGATCACAGTTCATGCCTATC 7549
Query 18847 AATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGC--CTCTGAT- 18903
| | ||||| | ||| ||||| | ||||||||||| || || || || | || ||
Sbjct 7548 ATTGCCACAGGCAATGCCTCTGTCAAGAATTCTTGTTCAATCTTAACAGCATCCCTAATG 7489
Query 18904 ATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACAT 18963
||| || || | ||||| ||| |||| | | || ||| || ||||| | |||
Sbjct 7488 ATACTA-AT-TATTTCTAT-TTCTGTAGGCTTCTGGACAACATGCTTGAACATAAGGCAT 7432
Query 18964 GCAAAATCACAATGTAGTCCCT 18985
|| || ||||| || || ||||
Sbjct 7431 GCGAAGTCACAGTGGAGACCCT 7410
>seq599987
Length=38784
Score = 122 bits (134), Expect = 1e-22
Identities = 166/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 48354 TTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACA 48413
||||| || || ||||| | |||||||| |||||||||||| || | ||||| || ||
Sbjct 36365 TTATTTCCACCCTGATCCACATATCTGGAAGTATTGTTATATACACGCAACATAGGAACC 36424
Query 48414 ATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTA 48473
| |||||| ||| |||||||||| || | ||| ||||||||| ||| | ||| |
Sbjct 36425 AGACCATTGGATGTACCATTGGTGCCAGCAATGTAACTTCCAGCAGCACGGATA----CA 36480
Query 48474 ATTGA----AATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGT 48529
|| || || || ||||||||||| ||| || || | ||||| | || | ||
Sbjct 36481 ATGGACGCTAAGGCCAATACCACCTGCAGATTTGGAGATCATGGCACATTGCTTCAAAGT 36540
Query 48530 ATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACT 48580
||||||||| ||||| ||||| || || |||| || || ||||| ||
Sbjct 36541 ATCATAAATACCTTCAATACTGTCCTCCTTCATGCACAACAGGAAACAGCT 36591
Score = 95.1 bits (104), Expect = 1e-14
Identities = 109/147 (74%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 47051 CCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATT 47110
|||| |||| |||||||| |||| || |||| | || || | |||||| || ||
Sbjct 2112 CCATGCATAAAAATGCATTGATGTTAGCTTTCCATAATTTGGCTCAGCAATATGTATGTT 2171
Query 47111 AAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCT 47170
||||| |||||||||||||| || || ||||||||||||||||| | | ||| |
Sbjct 2172 GAGAGACTGACTCTGATCAATGAAAGCTCCTCTATCAGCTGCCATTTTGATAATTGTTTT 2231
Query 47171 TTGTGGTATCTCCCATACTGTTTTATA 47197
|| || || ||||| || ||||||||
Sbjct 2232 CTGAGGAATTTCCCACACAGTTTTATA 2258
Score = 89.7 bits (98), Expect = 6e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387
|||||||||||||| | || | || |||||||||| || ||||||||||| | ||
Sbjct 15439 TGAAATTCTCCAGACAAAACGCGGCGTGTATATATATTGCTGGTATATGGTTCAAAGGAC 15498
Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGC 47434
||||| ||||||| ||||| ||||| ||||| || ||||| | |||
Sbjct 15499 TCATTGTTTCCAAGTATTTGGGCAGTCGATGCAGTTGGCATTGGTGC 15545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552289518110880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |