Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq1174552 111 5e-20 >seq1174552 Length=209 Score = 111 bits (122), Expect = 5e-20 Identities = 119/156 (76%), Gaps = 6/156 (4%) Strand=Plus/Minus Query 24828 CTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATC 24887 |||||||||||||| || ||||| ||| ||| | |||||||||||||| ||||| || Sbjct 160 CTGAGCTGCCAGCTGTATCAGCGTTCCGCCGACATCTTCCTCGGCGTGCCCTTCAACATT 101 Query 24888 GCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCT---CGGACTGAAGGTCGGC 24944 || ||||| |||||| |||||| | | | || |||| | ||| ||| || ||| Sbjct 100 GCCAGCTATGCGCTGTTGACCC---TGATGGTGGCCCAGGTCACCGGGCTGCAGCCGGGC 44 Query 24945 GAATTCATCTGGACCGGCGGCGACGTCCACCTGTAT 24980 |||||||||||||||||||| || ||| || ||| Sbjct 43 GAATTCATCTGGACCGGCGGTGATTGCCATCTCTAT 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 161448316676416