Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq1309815 122 3e-23 >seq1309815 Length=454 Score = 122 bits (134), Expect = 3e-23 Identities = 235/347 (68%), Gaps = 0/347 (0%) Strand=Plus/Plus Query 21691 CGGTGATGTTCACCGTACCCGGCGAGCCGGTGGGGAAGGGGAGACCGCGTATCGGTCGCG 21750 ||||| |||| ||||||||| |||| | || ||||| | || |||||||| Sbjct 107 CGGTGGAGTTCGTGGTACCCGGCAAGCCCATCGGCAAGGGCCGCCCCCGTATCGGCAAGA 166 Query 21751 TCGGCGCCCACGCCAGGATGTTCACGCCGGCGAAGACGGCGGCCTACGAAGGCCTGGTAG 21810 | |||||||| ||| | ||||||||||| | | |||| |||||| || || ||| | | Sbjct 167 TGGGCGCCCATGCCCGCATGTTCACGCCAAAGGAAACGGTGGCCTATGAGGGGCTGATCG 226 Query 21811 CCATGGCTGCCCAGGAAGCGCTCGCAGGACGCCCCCTGATCGCCGGCCCCGTGCTCATCG 21870 || || |||||| || | || || || ||||||| | ||||||| | ||| Sbjct 227 CCCACGCAGCCCAGATCGCCATGGCCGGCCGGGGCCTGATCCCGCACCCCGTGATGGTCG 286 Query 21871 AACTGCGGATGTTCCACCCCATTCCGCGGTCCTGGTCGAAGAAGCGCCAGGCCATGGCCT 21930 | |||| ||| | | ||||| || | ||| |||||| ||| | ||||| |||| Sbjct 287 AGCTGCAGATCCTGCTGCCCATCCCTCAGTCGAAGTCGAAAAAGTGGAAGGCCCAGGCCG 346 Query 21931 TGGTCGGCGAGGTCATGCCTACCGTGAAATGCGATGCCGACAACTGCCTGAAGGCGGTGT 21990 | | |||| |||| | || ||| ||| ||| |||||| | | || ||| | | Sbjct 347 TAGCCGGCCAGGTGTTCCCGACCACGAAGCCCGACATGGACAACGTCATCAAAGCGATCT 406 Query 21991 GTGACGCGCTCAATGGGGTGGCCTGGAAGGACGACACCCAGGTCGTC 22037 |||| || || || |||| |||| ||||||| |||||| ||| Sbjct 407 ACGACGGCCTGAACGGCGTGGTCTGGCGGGACGACGTCCAGGTGGTC 453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154503118740488