Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq791531 138 1e-27 >seq791531 Length=8839 Score = 138 bits (152), Expect = 1e-27 Identities = 144/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 37446 ATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGA 37505 || || |||||||| || | ||||||||| ||||| || | ||| || ||||| || || Sbjct 7000 ATGTATGTATCAATGAGAAGACTATACATCTCAGAATGCACATTCTCCATAGCAATTTGG 6941 Query 37506 AAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAG 37565 || ||||| ||||| || ||||||| || |||||| || | | ||||| | | | | | Sbjct 6940 AAGCCATAGAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTGAACCTTTCAACCAGG 6881 Query 37566 TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGT 37625 ||||| ||||| || ||||||||||| || |||||||| ||||||| || ||||| Sbjct 6880 TTTTCGTTAACAATGCCATCACTAGCAGCGAAGAAAGCTAGAACATGGGAAATGAAATGC 6821 Query 37626 CTTTCATCA 37634 ||||| ||| Sbjct 6820 CTTTCTTCA 6812 Score = 102 bits (112), Expect = 9e-17 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 |||||||| || | |||||| ||| || | ||||||||||||||||| || ||| Sbjct 7337 TCATCTCTTGAAATAAGTTCATTGCTAAATGTAAGACCTGGCATTAAACCTCTCTTCTTA 7278 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||| || || ||||||||| ||||| ||||| || ||||| || || |||||||| Sbjct 7277 AGCCAGAAAATAGCTGCAAAACTGCCAGAGAAGAATATGCCTTCCACAGCAGCAAATGCA 7218 Query 37320 ACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCC 37379 | | ||| | || || | | | ||||| |||||| | || ||| || ||| Sbjct 7217 ATTACACGCTCTGCAAATGTGGCAGATTCATCAGCAATCCACCTGAGTGCCCAGTCAGCC 7158 Query 37380 TTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAA 37423 ||| || |||||| | |||||||| || || ||||| || Sbjct 7157 TTTTTCTTTACACATGGCAAAGTTTCAATAGCATTGAAGAGGAA 7114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581969825131680