Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq791531 138 1e-27
>seq791531
Length=8839
Score = 138 bits (152), Expect = 1e-27
Identities = 144/189 (76%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 37446 ATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGA 37505
|| || |||||||| || | ||||||||| ||||| || | ||| || ||||| || ||
Sbjct 7000 ATGTATGTATCAATGAGAAGACTATACATCTCAGAATGCACATTCTCCATAGCAATTTGG 6941
Query 37506 AAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAG 37565
|| ||||| ||||| || ||||||| || |||||| || | | ||||| | | | | |
Sbjct 6940 AAGCCATAGAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTGAACCTTTCAACCAGG 6881
Query 37566 TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGT 37625
||||| ||||| || ||||||||||| || |||||||| ||||||| || |||||
Sbjct 6880 TTTTCGTTAACAATGCCATCACTAGCAGCGAAGAAAGCTAGAACATGGGAAATGAAATGC 6821
Query 37626 CTTTCATCA 37634
||||| |||
Sbjct 6820 CTTTCTTCA 6812
Score = 102 bits (112), Expect = 9e-17
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259
|||||||| || | |||||| ||| || | ||||||||||||||||| || |||
Sbjct 7337 TCATCTCTTGAAATAAGTTCATTGCTAAATGTAAGACCTGGCATTAAACCTCTCTTCTTA 7278
Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319
| ||| || || ||||||||| ||||| ||||| || ||||| || || ||||||||
Sbjct 7277 AGCCAGAAAATAGCTGCAAAACTGCCAGAGAAGAATATGCCTTCCACAGCAGCAAATGCA 7218
Query 37320 ACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCC 37379
| | ||| | || || | | | ||||| |||||| | || ||| || |||
Sbjct 7217 ATTACACGCTCTGCAAATGTGGCAGATTCATCAGCAATCCACCTGAGTGCCCAGTCAGCC 7158
Query 37380 TTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAA 37423
||| || |||||| | |||||||| || || ||||| ||
Sbjct 7157 TTTTTCTTTACACATGGCAAAGTTTCAATAGCATTGAAGAGGAA 7114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 581969825131680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |