Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_018452.1
Length=61847
Score E
Sequences producing significant alignments: (Bits) Value
seq516988 170 7e-38
seq1174245 89.7 2e-13
seq516989 89.7 2e-13
>seq516988
Length=1185
Score = 170 bits (188), Expect = 7e-38
Identities = 179/235 (76%), Gaps = 3/235 (1%)
Strand=Plus/Minus
Query 10055 TCCGCCTCGCTACGACCGATCGCTACAAGGACAAGGCGAGCGGCGAGATGAAGGAATCGA 10114
||||| | || || ||||| ||||||||||||||||||||||| || ||||||||| | |
Sbjct 1185 TCCGCGTGGCCACCACCGACCGCTACAAGGACAAGGCGAGCGGAGAAATGAAGGAAGCCA 1126
Query 10115 CCGAATGGCACCGCGTCAGCTTCTTCGGCCGCCTCGCCGAGATCGTCGACGAGTACCTGC 10174
| || ||||||||| || ||||||||||||| | || || || | || ||| ||||||
Sbjct 1125 CGGAGTGGCACCGCATCGCCTTCTTCGGCCGCTTGGCAGAAATTGCCGGCGAATACCTGA 1066
Query 10175 GCAAGGGCGCGCCGGTCTACATCGAGGGCCGCATCCGCACGCGGAAGTGGCAGGATAACG 10234
||||| || ||||||||||||||||| | || || |||| ||| || |
Sbjct 1065 AGAAGGGTTCGTCGGTCTACATCGAGGGCAAGCTGAAGACTCGCCAGTG---GGAGAAGG 1009
Query 10235 CCGGCCAGGATCGCTACACGACCGAGATCGTCGCCGAGAAGATGCAGATGCTCGG 10289
|||||| | | |||| |||||||||||||| || ||||||||||||| ||
Sbjct 1008 ATGGCCAGAAACAGTACAGCACCGAGATCGTCGCAGACCAGATGCAGATGCTGGG 954
>seq1174245
Length=209
Score = 89.7 bits (98), Expect = 2e-13
Identities = 139/194 (72%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 2796 CAAGATCATCGCGTTCGCGATCTTCTCGACGCGGCGGCAGGAGGAGATCATCAGGATCAC 2855
|||| | ||||| ||||| |||||||| || || || ||||||||||||| |||||
Sbjct 193 CAAGGTGATCGCCTTCGCCATCTTCTCAACCCGCCGCCAGGAGGAGATCACGCGGATCCG 134
Query 2856 GTGGGCCGACCTCAACGAG-GAGGAGAGCACGCAGATCGTGCGCGACGTGAAGCACCCGC 2914
|||| |||||| ||||| | | || || | | ||||||||| ||||| ||||
Sbjct 133 CTGGGACGACCTAGACGAGCGCCGCCAG-GCGGTGCTGGTGCGCGACATGAAGAACCCCG 75
Query 2915 GCAAGAAGATCGGCAACGA--TCAGGAATCGCGGCTCACGCCCGAGGCGCTGGCGATCAT 2972
| |||||||||| ||| | || || | | ||| || |||||| ||||||| |
Sbjct 74 GACAGAAGATCGGTAACCACGTCTGG--TGCCACCTCCCGGACGAGGCTTGGGCGATCCT 17
Query 2973 CAAATCGATGCCGC 2986
| ||||||||||
Sbjct 16 GCAGTCGATGCCGC 3
>seq516989
Length=1305
Score = 89.7 bits (98), Expect = 2e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 9961 GACATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAAC 10019
|| |||||||||||||||||||||||| |||||||||||||||||||||| || |||||
Sbjct 60 GAAATGGCATCCGTCAACAAAGTCATCATCGTCGGCAATCTCGGCGCCGATCCAGAAAC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 194506451844936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |