Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq814409 91.5 2e-13 seq556636 91.5 2e-13 seq544915 91.5 2e-13 >seq814409 Length=10231 Score = 91.5 bits (100), Expect = 2e-13 Identities = 144/205 (70%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 197089 TAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCT 197148 ||||| || | || || | || || ||||| |||||||| ||| ||| | | || Sbjct 3665 TAACACGCCAACAAAAAGCCACCATACGTTCCAGTTCTCTTACCCCGGCCGAGGTAACCA 3724 Query 197149 CCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTG 197208 || || || |||| ||||| ||| || | ||| ||||| | ||||||||||||| ||| Sbjct 3725 CCTATGACAACCACATCCAAAGTATCTCCCACACCTTCAAGATAATCTTTCTTCAATTTT 3784 Query 197209 AGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATC 197268 |||||| | || |||| || ||||| || || || || | | | || || || || | | Sbjct 3785 AGCCAGTTCCTGGATCGTTTTGCAATTTCATATGTCGCCTCTTCATCTAGTGTTTTTACC 3844 Query 197269 ATCAATCCCTCGCAATCTTCCTTCA 197293 || | || || || | ||||| || Sbjct 3845 ATAAGACCTTCACAGT-TTCCTGCA 3868 >seq556636 Length=20116 Score = 91.5 bits (100), Expect = 2e-13 Identities = 144/205 (70%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 197089 TAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCT 197148 ||||| || | || || | || || ||||| |||||||| ||| ||| | | || Sbjct 6231 TAACACGCCAACAAAAAGCCACCATACGTTCCAGTTCTCTTACCCCGGCCGAGGTAACCA 6172 Query 197149 CCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTG 197208 || || || |||| ||||| ||| || | ||| ||||| | ||||||||||||| ||| Sbjct 6171 CCTATGACAACCACATCCAAAGTATCTCCCACACCTTCAAGATAATCTTTCTTCAATTTT 6112 Query 197209 AGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATC 197268 |||||| | || |||| || ||||| || || || || | | | || || || || | | Sbjct 6111 AGCCAGTTCCTGGATCGTTTTGCAATTTCATATGTCGCCTCTTCATCTAGTGTTTTTACC 6052 Query 197269 ATCAATCCCTCGCAATCTTCCTTCA 197293 || | || || || | ||||| || Sbjct 6051 ATAAGACCTTCACAGT-TTCCTGCA 6028 >seq544915 Length=29513 Score = 91.5 bits (100), Expect = 2e-13 Identities = 144/205 (70%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 197089 TAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCT 197148 ||||| || | || || | || || ||||| |||||||| ||| ||| | | || Sbjct 13369 TAACACGCCAACAAAAAGCCACCATACGTTCCAGTTCTCTTACCCCGGCCGAGGTAACCA 13310 Query 197149 CCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTG 197208 || || || |||| ||||| ||| || | ||| ||||| | ||||||||||||| ||| Sbjct 13309 CCTATGACAACCACATCCAAAGTATCTCCCACACCTTCAAGATAATCTTTCTTCAATTTT 13250 Query 197209 AGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATC 197268 |||||| | || |||| || ||||| || || || || | | | || || || || | | Sbjct 13249 AGCCAGTTCCTGGATCGTTTTGCAATTTCATATGTCGCCTCTTCATCTAGTGTTTTTACC 13190 Query 197269 ATCAATCCCTCGCAATCTTCCTTCA 197293 || | || || || | ||||| || Sbjct 13189 ATAAGACCTTCACAGT-TTCCTGCA 13166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 664908047472960