Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_019917.1
Length=62952
Score E
Sequences producing significant alignments: (Bits) Value
seq516988 156 2e-33
seq1174245 125 3e-24
seq516989 84.2 9e-12
>seq516988
Length=1185
Score = 156 bits (172), Expect = 2e-33
Identities = 176/235 (75%), Gaps = 3/235 (1%)
Strand=Plus/Minus
Query 9787 TCCGCCTCGCGACGACCGATCGTTACAAGGACAAAGCCAGCGGCGACTTCAAAGAAGTGA 9846
||||| | || || ||||| || ||||||||||| || ||||| || | || |||| |
Sbjct 1185 TCCGCGTGGCCACCACCGACCGCTACAAGGACAAGGCGAGCGGAGAAATGAAGGAAGCCA 1126
Query 9847 CCGAGTGGCACCGCGTCGCCTTCTTCGGCCGCCTCGCCGAGATCGTCGACGAGCACCTGC 9906
| |||||||||||| ||||||||||||||||| | || || || | || ||| |||||
Sbjct 1125 CGGAGTGGCACCGCATCGCCTTCTTCGGCCGCTTGGCAGAAATTGCCGGCGAATACCTGA 1066
Query 9907 GCAAGGGCGCATCGGTCTACATCGAGGGGCGCATCAAAACGCGGAAGTGGCAGGATCAAT 9966
||||| | ||||||||||||||||| | || || || ||||| || | |
Sbjct 1065 AGAAGGGTTCGTCGGTCTACATCGAGGGCAAGCTGAAGACTCGCCAGTGGGAGAAGGA-- 1008
Query 9967 CCGGCCAGGATCGCTACACGACCGAGATCGTCGCCGACAAGATGCAGATGCTCGG 10021
|||||| | | |||| |||||||||||||| ||| ||||||||||||| ||
Sbjct 1007 -TGGCCAGAAACAGTACAGCACCGAGATCGTCGCAGACCAGATGCAGATGCTGGG 954
>seq1174245
Length=209
Score = 125 bits (138), Expect = 3e-24
Identities = 148/196 (76%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 3170 CAAGATCATCGCGTTCGCGATCTTCGCGACGCGGCGCCAGGAGGAGATCACGGCGATCCG 3229
|||| | ||||| ||||| |||||| | || || |||||||||||||||||| ||||||
Sbjct 193 CAAGGTGATCGCCTTCGCCATCTTCTCAACCCGCCGCCAGGAGGAGATCACGCGGATCCG 134
Query 3230 CTGGGACGACCTGAACGAG-GAGGAGAGCACGCAGCTCGTGCGCGACGTGAAGCACCCGC 3288
|||||||||||| ||||| | | || || ||| ||||||||| ||||| ||||
Sbjct 133 CTGGGACGACCTAGACGAGCGCCGCCAG-GCGGTGCTGGTGCGCGACATGAAGAACCCCG 75
Query 3289 GCAAGAAGATCGGCAACGA--TCAGGAATCGCGGCTCACGCCCGAGGCGCTGGCGATCAT 3346
| |||||||||| ||| | || || | | ||| || |||||| ||||||| |
Sbjct 74 GACAGAAGATCGGTAACCACGTCTGG--TGCCACCTCCCGGACGAGGCTTGGGCGATCCT 17
Query 3347 CAAGTCGATGCCGCGC 3362
||||||||||||||
Sbjct 16 GCAGTCGATGCCGCGC 1
>seq516989
Length=1305
Score = 84.2 bits (92), Expect = 9e-12
Identities = 52/56 (93%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 9696 ATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAAC 9751
|||||||||||||||||||||||| |||||||||||||||| ||||| || |||||
Sbjct 57 ATGGCATCCGTCAACAAAGTCATCATCGTCGGCAATCTCGGCGCCGATCCAGAAAC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 197983771155856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |