Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq516988 156 2e-33 seq1174245 125 3e-24 seq516989 84.2 9e-12 >seq516988 Length=1185 Score = 156 bits (172), Expect = 2e-33 Identities = 176/235 (75%), Gaps = 3/235 (1%) Strand=Plus/Minus Query 9787 TCCGCCTCGCGACGACCGATCGTTACAAGGACAAAGCCAGCGGCGACTTCAAAGAAGTGA 9846 ||||| | || || ||||| || ||||||||||| || ||||| || | || |||| | Sbjct 1185 TCCGCGTGGCCACCACCGACCGCTACAAGGACAAGGCGAGCGGAGAAATGAAGGAAGCCA 1126 Query 9847 CCGAGTGGCACCGCGTCGCCTTCTTCGGCCGCCTCGCCGAGATCGTCGACGAGCACCTGC 9906 | |||||||||||| ||||||||||||||||| | || || || | || ||| ||||| Sbjct 1125 CGGAGTGGCACCGCATCGCCTTCTTCGGCCGCTTGGCAGAAATTGCCGGCGAATACCTGA 1066 Query 9907 GCAAGGGCGCATCGGTCTACATCGAGGGGCGCATCAAAACGCGGAAGTGGCAGGATCAAT 9966 ||||| | ||||||||||||||||| | || || || ||||| || | | Sbjct 1065 AGAAGGGTTCGTCGGTCTACATCGAGGGCAAGCTGAAGACTCGCCAGTGGGAGAAGGA-- 1008 Query 9967 CCGGCCAGGATCGCTACACGACCGAGATCGTCGCCGACAAGATGCAGATGCTCGG 10021 |||||| | | |||| |||||||||||||| ||| ||||||||||||| || Sbjct 1007 -TGGCCAGAAACAGTACAGCACCGAGATCGTCGCAGACCAGATGCAGATGCTGGG 954 >seq1174245 Length=209 Score = 125 bits (138), Expect = 3e-24 Identities = 148/196 (76%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 3170 CAAGATCATCGCGTTCGCGATCTTCGCGACGCGGCGCCAGGAGGAGATCACGGCGATCCG 3229 |||| | ||||| ||||| |||||| | || || |||||||||||||||||| |||||| Sbjct 193 CAAGGTGATCGCCTTCGCCATCTTCTCAACCCGCCGCCAGGAGGAGATCACGCGGATCCG 134 Query 3230 CTGGGACGACCTGAACGAG-GAGGAGAGCACGCAGCTCGTGCGCGACGTGAAGCACCCGC 3288 |||||||||||| ||||| | | || || ||| ||||||||| ||||| |||| Sbjct 133 CTGGGACGACCTAGACGAGCGCCGCCAG-GCGGTGCTGGTGCGCGACATGAAGAACCCCG 75 Query 3289 GCAAGAAGATCGGCAACGA--TCAGGAATCGCGGCTCACGCCCGAGGCGCTGGCGATCAT 3346 | |||||||||| ||| | || || | | ||| || |||||| ||||||| | Sbjct 74 GACAGAAGATCGGTAACCACGTCTGG--TGCCACCTCCCGGACGAGGCTTGGGCGATCCT 17 Query 3347 CAAGTCGATGCCGCGC 3362 |||||||||||||| Sbjct 16 GCAGTCGATGCCGCGC 1 >seq516989 Length=1305 Score = 84.2 bits (92), Expect = 9e-12 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 9696 ATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAAC 9751 |||||||||||||||||||||||| |||||||||||||||| ||||| || ||||| Sbjct 57 ATGGCATCCGTCAACAAAGTCATCATCGTCGGCAATCTCGGCGCCGATCCAGAAAC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197983771155856