Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq206 105 9e-18 >seq206 Length=20865 Score = 105 bits (116), Expect = 9e-18 Identities = 164/234 (70%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 47843 CCTCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATA 47902 |||| ||||||||| | ||||| ||||| || | || |||||||||||| || | | Sbjct 17726 CCTCCACATAATCTTTTGCATGACCCCAATCTCTCTTTGAATCAAGATTTCCCAGTTCAA 17785 Query 47903 AACAGTCTTGCTTACCTTCAGAGATTGCTTTT----AATGCTCTTGTAATCTTACGAGTT 47958 ||| || || ||| |||| | |||| | || | |||||| || | || Sbjct 17786 CACACTCCATCTGACC----AAGATGGATTTTTGCAACTGAACGTGTAATTTTTCTTGTC 17841 Query 47959 ACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATAC 48018 |||||| ||||||| | |||||| |||||||| || | || ||| |||||||| || Sbjct 17842 ACAAAATTTTCACCTCTTCTTGGGCTCTCATGATTGAACAATATTCCATTACAGGCAAAC 17901 Query 48019 ATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCA 48072 ||| || | ||| | |||||| || |||||||| ||||| ||||| ||| Sbjct 17902 ATTTTATAGGCTTCTCTGTAGTTCACAACAATCCAGTAGCCATAAAGTTTAGCA 17955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 653869111249440