Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq791531 84.2 3e-11 seq599987 84.2 3e-11 >seq791531 Length=8839 Score = 84.2 bits (92), Expect = 3e-11 Identities = 146/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 65003 AAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGT 65062 ||||| | |||||| | |||| ||||| | |||||| | | ||| ||| | | Sbjct 7133 AAACTTTGCCATGTGTAAAGAAAAAGGCTGACTGGGCACTCAGGTGGATTGCTGATGAAT 7192 Query 65063 CTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCG 65122 || | | || || ||||| | |||| ||||| |||||| || || |||||||| | Sbjct 7193 CTGCCACATTTGCAGAGCGTGTAATTGCATTTGCTGCTGTGGAAGGCATATTCTTCTCTG 7252 Query 65123 GGTCA-TTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTT 65180 | || || ||| ||||||| ||| | |||||| | ||| | |||||||| || || Sbjct 7253 G--CAGTTTTGCAGCTATTTTCTGGCTTAAGAAGAGAGGTTTAATGCCAGGTCTTACATT 7310 Query 65181 CTCAAATGAACTTATTTCCCGAGATGAGG 65209 |||||||||||||| ||||||||| Sbjct 7311 TAGCAATGAACTTATTTCAAGAGATGAGG 7339 >seq599987 Length=38784 Score = 84.2 bits (92), Expect = 3e-11 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 76412 CAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG-ACTGGGATGTTCTCAAGGA 76470 |||| |||||||||||| | | ||||| | ||| | | | |||| || |||||| || Sbjct 15644 CAGTATGATATGTGGGATGTT-AAACCTACTTCACTTTGGGATTGGGCTGCTCTCAAAGA 15586 Query 76471 ACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTC 76530 | || | | ||| |||| ||| ||| ||| |||||||||||||||| || || Sbjct 15585 AAAAATTGCTGTTCATGGTGTTCGCAACTCTCTCTTGTTGGCACCAATGCCAACTGCATC 15526 Query 76531 CACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACAC 76575 || || ||||| | || || ||||| | |||||||||||| || Sbjct 15525 GACTGCCCAAATACTTGGAAACAATGAGTCCTTTGAACCATATAC 15481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 586148334456960