Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq999499 185 1e-41 seq943055 154 2e-32 seq741633 149 9e-31 seq394145 143 4e-29 seq708045 134 2e-26 seq1373531 131 2e-25 seq303400 131 2e-25 seq1122698 123 4e-23 seq831174 118 2e-21 seq302911 116 5e-21 seq440555 113 6e-20 seq293104 113 6e-20 seq293103 113 6e-20 seq823614 111 2e-19 seq342672 109 8e-19 seq461362 105 1e-17 seq956675 102 1e-16 seq938424 100 4e-16 seq45895 87.8 3e-12 >seq999499 Length=18337 Score = 185 bits (204), Expect = 1e-41 Identities = 293/415 (71%), Gaps = 15/415 (4%) Strand=Plus/Plus Query 124973 TCAAAATTAAAA--GAAGAAAATTTAAATCTGCAAAGATTTAATATGAATATGAAAAATT 125030 ||||||| ||| |||||||| || || || ||| || ||||| ||||| | | Sbjct 2569 TCAAAATCAAAGATGAAGAAAACAAAAGACTCGAACAATTCAACATGAACATGAAGATCT 2628 Query 125031 TTATAGACAATGTCAAAGATAAAAATAAAAATGGTTTCATATATATAGCTACATCAACAA 125090 |||||||||| | | |||| ||||||| || ||| ||||||||||| |||| || Sbjct 2629 TTATAGACAA------ACAGAAAACAAAAAATGTTTACATCTATATAGCTACTTCAAAAA 2682 Query 125091 GATACGCTTCCATAAATAATTTTAAAATAGGCAAAACAGATAATTTATTAACAAGATTAT 125150 |||| ||| || || || |||||| | || ||||||| || || | | || | Sbjct 2683 GATATTCTTTAATCAACAACTTTAAAGTTGGACAAACAGAGAACTTGTCTATTCGAAACT 2742 Query 125151 CAAATTTCAACTCATCGCGTAATGATCAAGATTTATTTTATATATGTTATTACGATAAAG 125210 | ||||| || || || | ||||| |||||| ||||||||| | | ||| |||||| Sbjct 2743 CTAATTTTAATTCTTCACACAATGAACAAGATAAATTTTATATCTCCTTCTACAATAAAG 2802 Query 125211 TGTATGACATGGCA--AAAACAGAAAAATTAATTCATGATTTATTAAATGATTTTAGAGA 125268 |||||| ||| || |||||| |||| | |||||||| ||||| || |||| ||| Sbjct 2803 TGTATG--ATGTCAATAAAACATAAAATATGATTCATGAGTTATTGGATAATTT--CAGA 2858 Query 125269 TAAAAAGGGTAAAGAAATATTCATTTTACATTATATTCCGCTTATAGAAATAGttaaatt 125328 ||||||| ||| | || ||| |||||| || | || ||| | | || |||||||| Sbjct 2859 TAAAAAGAATAAGAATATCTTCGCTTTACACTACACACCACTTCTCAAGATTGTTAAATT 2918 Query 125329 agtaataaaaaatataaacgaaccttatgattatattaataatttaatcaaaaat 125383 | | || |||| ||||| || |||| | || |||||| || ||| |||||| Sbjct 2919 AATGAT-TAAAACATAAATGAGCCTTTCAACTACATTAATGATCTAACTAAAAAT 2972 >seq943055 Length=9452 Score = 154 bits (170), Expect = 2e-32 Identities = 281/410 (69%), Gaps = 26/410 (6%) Strand=Plus/Plus Query 124977 AATTAAAAGAAGAAA---ATTTAAATCTGCAAAGATTTAATATGAATATGAAAAATTTTA 125033 |||||||||| |||| | || || ||| ||| || | || || | || ||||| Sbjct 3627 AATTAAAAGAGGAAAGCAACGTA---CTTGAAAAATTCAACAGGAGTAAGGAAGTTTTTA 3683 Query 125034 TAGACAATGTCAAAGATAAAAATAAAAATGGTTTCATATATATAGCTACATCAACAAGAT 125093 | ||||| |||||| | || ||||| | |||||||| |||| ||||| Sbjct 3684 TTGACAAAGTCAAACA----AACAAAAA-----------ACATAGCTACTTCAAAAAGAT 3728 Query 125094 ACGCTTCCATAAATAATTTTAAAATAGGCAAAACAGATAATTTATTAACAAGATTATCAA 125153 || ||| || || || |||||| | || |||||||| || || | | || |||| Sbjct 3729 ACTCTTTAATCAACAACTTTAAAGTGGGGAAAACAGAAAACTTGTCTATTCGACACTCAA 3788 Query 125154 ATTTCAACTCATCGCGTAATGATCAAGATTTATTTTATATATGTTATTACGATAAAGTGT 125213 |||| ||||| || | ||||| |||||| |||| | || || | ||||||||||||| Sbjct 3789 ATTTTAACTCTTCACACAATGAACAAGATAAATTTCAAATCTGCTTCTACGATAAAGTGT 3848 Query 125214 ATGACATGGCAAAAACAGAAAAATTAATTCATGATTTATTAAATGATTTTAGAGATAAAA 125273 |||| | |||||||| || | ||| | || ||||| | | | |||||||||| Sbjct 3849 ATGATGTTAATAAAACAGAGAAGATGATTGACGAGTTATTGGACGCCATCAGAGATAAAA 3908 Query 125274 AGGGTAAAGAAATATTCATTTTACATTATATTCCGCTTATAGAAATAGttaaattagtaa 125333 || || | || |||||||||||||| | | | || | | || ||||||||| | Sbjct 3909 AG---AACAAGATCTTCATTTTACATTACACTACACTGCTCTATATTGTTAAATTAACGA 3965 Query 125334 taaaaaatataaacgaaccttatgattatattaataatttaatcaaaaat 125383 | ||||| ||||||||||| || || |||||| || || |||||| Sbjct 3966 TTAAAAAGATAAACGAACC--ATTCCTACATTAATGATCAAACTAAAAAT 4013 >seq741633 Length=11487 Score = 149 bits (164), Expect = 9e-31 Identities = 142/182 (78%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| | ||||| ||||||||||||||||||||||||||||| |||| || Sbjct 10008 ATGCAGATATTTGTGAAAACCTTGACTGGAAAAACTATTACATTAGAAGTAGAAGCATCC 10067 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || || || ||| || || || |||||||||||||| || ||||| || Sbjct 10068 GATACCATAGAGAATGTAAAAGCGAAGATCCAGGATAAAGAAGGCATTCCGCCAGACCAG 10127 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||| | ||| || |||||||| |||||| | || || || ||||||||| Sbjct 10128 CAGAGATTGATCTTTGCAGGAAAGCAGCTGGAAGATGGGCGGACCTTGTCTGATTATAAT 10187 Query 156003 AT 156004 || Sbjct 10188 AT 10189 Score = 138 bits (152), Expect = 2e-27 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| | || ||| | ||||| ||||| |||||||| ||||| || | || Sbjct 10463 AATGCAAATTTTTGTGAAGACACTTACTGGCAAAACAATTACATTGGAAGTTGAGGCATC 10522 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | ||| ||| |||||| ||| || ||||||||||||||||| |||||||| || Sbjct 10523 TGACACAATTGAAAATGTGAAAGCTAAGATTCAAGATAAAGAAGGCATCCCTCCAGACCA 10582 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||| | | || | ||| || |||||||| |||||| || || ||||| ||||| || Sbjct 10583 ACAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGAAGGACCTTATCTGATTACAA 10642 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || || || | || | ||||||||| Sbjct 10643 CATTCAGAAGGAATCCACTTTGCATTTAGTG 10673 Score = 113 bits (124), Expect = 6e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || ||| | ||||||||||| ||||| | ||||| |||| ||| Sbjct 9780 ATGCAGATCTTTGTGAAGACACTTACTGGAAAAACCATTACCCTGGAAGTGGAAGCTTCA 9839 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||| |||||| || || || ||||||||||| || |||||||| || Sbjct 9840 GACACCATCGAAAATGTGAAAGCGAAGATCCAGGATAAAGAAGGTATTCCTCCAGACCAG 9899 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | || | ||| || |||||||| |||||| | || |||| || || ||| Sbjct 9900 CAACGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGACGGACCCTATCTGACTACAAT 9959 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || |||||| | || | ||| | ||| |||| || |||| || Sbjct 9960 ATTCAGAAAGAGTCCACTTTGCATCTGGTGCTAAGGTTGCGAGGTGG 10006 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | || || || || || ||| | ||||| |||| ||| Sbjct 8640 ATGCAGATTTTTGTAAAGACCCTCACAGGCAAGACCATCACACTGGAAGTGGAAGCTTCA 8699 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||| ||||| || || || || |||||||| || || ||||| || Sbjct 8700 GACACAATTGAAAATGTGAAGGCAAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAG 8759 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | |||| ||| ||||||||||| |||||| | | ||| | || ||||| ||| Sbjct 8760 CAACGTCTCATTTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACTCTGTCTGATTACAAT 8819 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || |||| || ||| | ||||| || || |||| ||| Sbjct 8820 ATTCAGAAGGAATCGACTCTCCATCTGGTGTTGAGGTTGCGAGGAGGT 8867 Score = 102 bits (112), Expect = 1e-16 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | ||||| || || ||||| | || || |||| |||| Sbjct 10236 ATGCAGATTTTTGTGAAGACTCTTACTGGCAAGACAATTACTCTGGAGGTGGAAGCTTCT 10295 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| || || ||||| || |||||||| |||||||| ||| Sbjct 10296 GACACCATTGAGAATGTCAAAGCAAAGATCCAAGACAAGGAAGGCATTCCTCCAGATCAA 10355 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| || || ||| | |||||| || || ||||||||||| | Sbjct 10356 CAGCGACTCATCTTTGCAGGAAAACAGTTGGAAGATGGAAGGACCTTATCAGATTACA-- 10413 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 | ||||||| || | || || ||||| || | || ||||||| || Sbjct 10414 ACATCCAAAAGGAATCTACTCTGCATTTGGTTCTGAGGCTAAGAGGTGG 10462 >seq394145 Length=17524 Score = 143 bits (158), Expect = 4e-29 Identities = 254/367 (69%), Gaps = 15/367 (4%) Strand=Plus/Minus Query 125024 AAAAA--TTTTATAGACAATGTCAAAGATAAAAATAAAAATGGTTTCATATATATAGCTA 125081 ||||| |||||| || || |||||| | || |||||||||| | | || ||| | | Sbjct 12407 AAAAAGTTTTTATCGAAAAAGTCAAACA----AACAAAAATGGTTACTTCTACATACCAA 12352 Query 125082 CATCAACAAGAT-ACGCTTCCATAAATAATTTTAAAATAGGCAAAACAGATAATTT---- 125136 | | || || | || ||| || || || |||||| | | ||| |||| || || Sbjct 12351 CTTAAAAAAATTTACTCTTTTATCAACAAATTTAAAGCAAGAAAACCAGAGAACTTGTCT 12292 Query 125137 ATTAACAAGATTATCAAATTTCAACTCATCGCGTAATGATCAAGATTTATTTTATATATG 125196 ||| | ||| || || ||||| || | | ||||| ||| || ||||||||| || Sbjct 12291 ATTCAAAAG----TCGAAATTCAATTCTACACACAATGAACAACATAAATTTTATATCTG 12236 Query 125197 TTATTACGATAAAGTGTATGACATGGCAAAAACAGAAAAATTAATTCATGATTTATTAAA 125256 | | |||||||||||||| | ||||||| ||| | ||||| || ||||| | Sbjct 12235 CTTCTCTGATAAAGTGTATGATGTTAATAAAACAGTAAAGATGATTCACGAGTTATTGGA 12176 Query 125257 TGATTTTAGAGATAAAAAGGGTAAAGAAATATTCATTTTACATTATATTCCGCTTATAGA 125316 || || ||||||||||| || | || |||||||||||||| | || || | || Sbjct 12175 CGACTTCAGAGATAAAAACAACAAGGTGATCTTCATTTTACATTACACACCACTCCTCGA 12116 Query 125317 AATAGttaaattagtaataaaaaatataaacgaaccttatgattatattaataatttaat 125376 || ||||||||| || |||| |||||| |||||| || || |||||| || ||| Sbjct 12115 GATTGTTAAATTAACGATTGAAAACATAAACTAACCTTTCGACTACATTAATGATCTAAC 12056 Query 125377 caaaaat 125383 |||||| Sbjct 12055 TAAAAAT 12049 >seq708045 Length=25632 Score = 134 bits (148), Expect = 2e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 |||||||| |||||| | || || ||||| || || ||||| || ||||| || |||| | Sbjct 10388 AAAATGCAGATATTTGTGAAGACTTTGACGGGGAAGACTATCACCTTAGAGGTAGAAGCT 10447 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || |||| ||| ||| || ||| ||||| || ||||||||||| || || || || Sbjct 10448 TCGGATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGGAATTCCCCCGGAT 10507 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 || || ||| |||| | ||| || |||||| | |||||| | |||| || || |||||| Sbjct 10508 CAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAACATTGTCTGATTAT 10567 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGA 156038 ||||| ||||| | || | || | ||||||||| Sbjct 10568 AATATCCAGAAAGAATCTACTTTACACCTTGTGTTAAGA 10606 >seq1373531 Length=884 Score = 131 bits (144), Expect = 2e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || |||||||| |||| || || ||||||||||| || || |||| ||| Sbjct 386 ATGCAGATCTTCGTTAAAACACTGACAGGGAAGACTATTACATTGGAGGTTGAAGCCTCT 327 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || ||||| |||||| ||||| || ||||| || |||||||| || Sbjct 326 GATACGATTGAGAATGTGAAGGCTAAAATTCAAGACAAGGAAGGAATTCCTCCAGACCAG 267 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||| | ||| || || || || |||||| ||||||||| ||||| || ||| Sbjct 266 CAGAGGCTGATATTTGCTGGGAAACAACTAGAAGATGGCAGAACTTTGTCAGACTACAAT 207 Query 156003 AT 156004 || Sbjct 206 AT 205 >seq303400 Length=5017 Score = 131 bits (144), Expect = 2e-25 Identities = 140/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 |||||||| |||||| | || || ||||| ||||| ||||| || ||||| || |||| | Sbjct 4826 AAAATGCAGATATTTGTGAAGACTTTGACGGGAAAGACTATCACCTTAGAGGTAGAAGCT 4885 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || |||| ||| ||| || ||| ||||| || ||||||||||| || || | || Sbjct 4886 TCGGATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGGAATTCCCACGGAT 4945 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 || || ||| |||| | ||| || |||||| | |||||| | |||| || || |||||| Sbjct 4946 CAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAACATTGTCTGATTAT 5005 Query 156000 AATAT 156004 ||||| Sbjct 5006 AATAT 5010 >seq1122698 Length=3135 Score = 123 bits (136), Expect = 4e-23 Identities = 275/409 (67%), Gaps = 9/409 (2%) Strand=Plus/Minus Query 116356 ATATTTACTTTTATTGATTATAATAACTATGATTTAAAACTCGGAAGCT-GGTTTAAAGA 116414 |||||| | |||| | ||||| |||||| | |||| ||||| || |||||||| Sbjct 2122 ATATTTGAATATATTAACTATAAAAACTATCAACTAAAT-TCGGATTCTTGGTTTAAATG 2064 Query 116415 TATATGGTTTCCATTGTTTGAACATAAAGATATGTTGATAACTAATGATATTTTATGCTT 116474 ||| || || |||| ||| || | || || ||||||| || || |||||||||| || Sbjct 2063 TATGTGAGTTTCATTATTTAAAAAGAAGAATGTGTTGATCACAAAAAATATTTTATGTTT 2004 Query 116475 TATTCATTACGGAATTTCAGGGGGCGGAAAGCCGCCCTCTGTAAAT-ATTAAACAAATTA 116533 ||||||||| | | ||||| | ||||| | ||| |||| ||| ||| | | Sbjct 2003 TATTCATTATGATACTTCAGACACTGTGAAGCCATCAGCTGAAAATTATTCGACATTTAA 1944 Query 116534 TGAAACATTTACTAGATTCAATAAAAAATTATAATTTACAATATACTGAANNNNNNNNNN 116593 | || || | | | || |||| |||||||| || |||| |||||| Sbjct 1943 TAGAA-ATGAAGTGCAATCTTTAAACAATTATAAACTAAAATACACTGAAATAATATATG 1885 Query 116594 NNNNNNNNNTAGCATTAGAATATGAATATATTCAAAATGATATTAAAAGTATAAAGCCTA 116653 | |||||||||||| ||||||||||||| | ||||| |||| | | Sbjct 1884 ATAATCGACTTT--TTAGAATATGAACATATTCAAAATGAGA-TAAAAATATATCAACAA 1828 Query 116654 ATAATTTATCTAGAAAAACTTGGATATTGTTATCTACTAGAAATTTTAAAAAATTAATAT 116713 |||||||| || |||||| ||||| | |||| || || ||| || || ||||||| | Sbjct 1827 ATAATTTAATTA-AAAAACATGGATGTGGTTACCTGTTAAAAACTTCAAGAAATTAAACT 1769 Query 116714 TATCTTTGAGAACTAAAGTAGCTGATGAAATTCGAGATTATTATATAAC 116762 | | || |||| | || || |||||||| ||| | |||||||| Sbjct 1768 GAGC-TTACGAACCTACGTTACTAATGAAATTAATGATCAATATATAAC 1721 >seq831174 Length=18794 Score = 118 bits (130), Expect = 2e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 |||||||| |||||| | || | ||||| || || ||||| || ||||| || |||| | Sbjct 4108 AAAATGCAGATATTTGTGAAGAATTTGACGGGGAAGACTATCACCTTAGAGGTAGAAGCT 4167 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || |||| ||| ||| || || ||||| || ||||||||||| || || | || Sbjct 4168 TCGGATACAATTGAAAATGTTAATGCCAAAATCCAGGATAAAGAAGGAATTCCCACGGAT 4227 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 || || ||| |||| | ||| || |||||| | |||||| | |||| || || |||||| Sbjct 4228 CAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAACATTGTCTGATTAT 4287 Query 156000 AATAT 156004 ||||| Sbjct 4288 AATAT 4292 >seq302911 Length=9965 Score = 116 bits (128), Expect = 5e-21 Identities = 136/184 (74%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||||||| | ||||| |||||||| ||||| || ||||||||||| || || Sbjct 1014 AATGCAAATATTTGTGAAAACGTTGACTGGCAAAACAATAACATTAGAAGTTGAGCCGTC 955 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | || ||| || ||| || || || |||||||||||||| || ||||| || Sbjct 954 AGACACAATAGAAAATGTCAAAGCAAAGATTCAGGATAAAGAAGGCATTCCACCAGACCA 895 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || | |||| ||| || || ||| | |||||| | ||| | |||||||| || Sbjct 894 GCAGAGGCTAATTTTTGCAGGGAAACAGTTGGAAGATGGACGGACTCTGTCAGATTACAA 835 Query 156002 TATA 156005 |||| Sbjct 834 TATA 831 >seq440555 Length=12508 Score = 113 bits (124), Expect = 6e-20 Identities = 157/218 (72%), Gaps = 8/218 (4%) Strand=Plus/Minus Query 155821 AAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATT 155880 ||||||| |||| | | || || ||||| || || ||||| || ||||| || |||| || Sbjct 552 AAATGCAGATATATGTGAAGACTTTGACGGGGAAGACTATCACCTTAGAGGTAGAAGCTT 493 Query 155881 CTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAAC 155940 | ||||| ||| ||| || ||| ||||| || || |||||||| || || ||||| | Sbjct 492 CGGATAAAATTGAAAATGTTAAAGCCAAAATCCAGGAAAAAGAAGGAATTCCCCCAGATC 433 Query 155941 AACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATA 156000 | || ||||| ||| || | ||||| | |||||| | |||| || || ||||||| Sbjct 432 AGCAGAGATT--TTTCTGGC---AAGCACTTAGAAGATGGCCGAACATTGTCTGATTATA 378 Query 156001 ATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGA 156038 |||| ||||| | || | ||| ||||||||| Sbjct 377 ATATCCAGAAAGAATCTACTTTACAT---GTGTTAAGA 343 >seq293104 Length=4254 Score = 113 bits (124), Expect = 6e-20 Identities = 242/362 (67%), Gaps = 22/362 (6%) Strand=Plus/Minus Query 116404 TGGTTTAAAGATATATGGTTTCCATTGTTTGAACATAAAGATATGTTGATAACTAATGAT 116463 ||||||||| ||| ||| |||||||||||||| | || || | ||||| || |||||| Sbjct 622 TGGTTTAAACTTATTTGGATTCCATTGTTTGAAAACAAGAATGTCTTGATCACAAATGAT 563 Query 116464 ATTTTATGCTTTATTCATTACGGAATTTCAGGGGGCGGAAAGCCGCCCTCTGTAAATATT 116523 ||| ||||| |||||||||| | ||| |||| | ||| | || | Sbjct 562 ATTATATGCATTATTCATTATTGTATTGCAGGTTTCAAGAAG------ACAGTTA----- 514 Query 116524 AAACAAATTATGAAACATTTACTAGATTCAATAAAAAATTATAATTTACAATATACTGAA 116583 |||| | ||||||||| ||||||| ||||||||||||||| ||||||||||| Sbjct 513 ----AAATAAAGAAACATTTTTTAGATTCTTAAAAAAATTATAATTTCGAATATACTGAA 458 Query 116584 NNNNNNNNNNNNNNNNNNNTAGCATTAGAATATGAATATATTCAAAATGATATTAAAAGT 116643 | | ||| ||||| |||||||||||||||| |||| Sbjct 457 ATAAAATGTGATAATCCACTTTCTTTAAAATATAAATATATTCAAAATGAAGAGAAAACA 398 Query 116644 ATAAAGCCTAATAATTTA-TCTAGAAAA-ACTTGGATATTGTTATCTACTAGAAATTTTA 116701 | || |||||| | || |||||| || |||| ||| || | || ||| || | Sbjct 397 CTTCCTGCTCATAATTGAGTCCAGAAAAGAC--GGATTTTGACAT-TCATAAAAAATTCA 341 Query 116702 AAAAATTAATATTATCTTTGAGAACTAAAGTA-GCTGATGAAATTCGAGATTATTATATA 116760 | ||| || || ||| | || ||||| | ||| |||||||| |||||||||||| Sbjct 340 AGAAACTAGTAACGAGTTT-ACAAATAAAGGATGCTAATGAAATTAATGATTATTATATA 282 Query 116761 AC 116762 || Sbjct 281 AC 280 >seq293103 Length=3296 Score = 113 bits (124), Expect = 6e-20 Identities = 242/362 (67%), Gaps = 22/362 (6%) Strand=Plus/Minus Query 116404 TGGTTTAAAGATATATGGTTTCCATTGTTTGAACATAAAGATATGTTGATAACTAATGAT 116463 ||||||||| ||| ||| |||||||||||||| | || || | ||||| || |||||| Sbjct 2141 TGGTTTAAACTTATTTGGATTCCATTGTTTGAAAACAAGAATGTCTTGATCACAAATGAT 2082 Query 116464 ATTTTATGCTTTATTCATTACGGAATTTCAGGGGGCGGAAAGCCGCCCTCTGTAAATATT 116523 ||| ||||| |||||||||| | ||| |||| | ||| | || | Sbjct 2081 ATTATATGCATTATTCATTATTGTATTGCAGGTTTCAAGAAG------ACAGTTA----- 2033 Query 116524 AAACAAATTATGAAACATTTACTAGATTCAATAAAAAATTATAATTTACAATATACTGAA 116583 |||| | ||||||||| ||||||| ||||||||||||||| ||||||||||| Sbjct 2032 ----AAATAAAGAAACATTTTTTAGATTCTTAAAAAAATTATAATTTCGAATATACTGAA 1977 Query 116584 NNNNNNNNNNNNNNNNNNNTAGCATTAGAATATGAATATATTCAAAATGATATTAAAAGT 116643 | | ||| ||||| |||||||||||||||| |||| Sbjct 1976 ATAAAATGTGATAATCCACTTTCTTTAAAATATAAATATATTCAAAATGAAGAGAAAACA 1917 Query 116644 ATAAAGCCTAATAATTTA-TCTAGAAAA-ACTTGGATATTGTTATCTACTAGAAATTTTA 116701 | || |||||| | || |||||| || |||| ||| || | || ||| || | Sbjct 1916 CTTCCTGCTCATAATTGAGTCCAGAAAAGAC--GGATTTTGACAT-TCATAAAAAATTCA 1860 Query 116702 AAAAATTAATATTATCTTTGAGAACTAAAGTA-GCTGATGAAATTCGAGATTATTATATA 116760 | ||| || || ||| | || ||||| | ||| |||||||| |||||||||||| Sbjct 1859 AGAAACTAGTAACGAGTTT-ACAAATAAAGGATGCTAATGAAATTAATGATTATTATATA 1801 Query 116761 AC 116762 || Sbjct 1800 AC 1799 >seq823614 Length=9049 Score = 111 bits (122), Expect = 2e-19 Identities = 209/304 (69%), Gaps = 4/304 (1%) Strand=Plus/Plus Query 125072 TATATAGCTACATCAACAAGATACGCTTCCATAAATAATTTTAAAATAGGCAAAACAGAT 125131 |||| | ||| |||| ||| || || ||||||||||||||| | | |||| |||| Sbjct 4664 TATACAACTATCTCAAAAAGGTATTATTTAATAAATAATTTTAAAGTTGAAAAAA-AGAT 4722 Query 125132 AATTTATTAACAAGATTATCAAATTTCAACTCATCGCGTAATGATCAAGATTTATTTTAT 125191 ||||| | ||| || ||||| || || || || || |||||| ||||| Sbjct 4723 AATTTGGCTATCAGAAACTCTAATTTTAATTCTTCAAAGAACGAACAAGATAATTTTTAC 4782 Query 125192 ATATGTTATTACGATAAAGTGTATGACATGGCAAAAACAGAAAAATTAATTCATGATTTA 125251 |||| || | ||||| | ||||| | | ||| | ||||||| |||||| | ||| Sbjct 4783 ATATATTGCCATGATAATGGATATGATGTAGACAAAGTA-AAAAATTTATTCATAAATTA 4841 Query 125252 TTAAATGATTTTAGAGATAAAAAGGGTAAAGAAATATTCATTTTACATTATATTCCGCTT 125311 | ||||||||||||||| | | ||||||| ||| ||||| |||| | | | Sbjct 4842 CTTGTTGATTTTAGAGATAAGA--GAATAAGAAATTTTCGTTTTATATTACACATCACAA 4899 Query 125312 ATAGAAATAGttaaattagtaataaaaaatataaacgaaccttatgattatattaataat 125371 ||||| ||||||||| | | |||| |||| | | | || |||||||||||| ||| Sbjct 4900 CCTGAAATTGTTAAATTAATGAATAAAACTATATATAAGCATTTTGATTATATTAACAAT 4959 Query 125372 ttaa 125375 ||| Sbjct 4960 CTAA 4963 >seq342672 Length=17310 Score = 109 bits (120), Expect = 8e-19 Identities = 197/281 (70%), Gaps = 21/281 (7%) Strand=Plus/Plus Query 116404 TGGTTTAAAGATATATGGTTTCCATTGTTTGAACATAAAGATATGTTGATAACTAATGA- 116462 |||| |||||||||||||||||| |||||| |||| ||| | || |||| || ||||| Sbjct 13640 TGGTATAAAGATATATGGTTTCCTTTGTTTAAACA-AAAAAAAT-CTGATTACAAATGAT 13697 Query 116463 TATTTTATGCTTTATTCATTACGGAATTTCAGGGGGCGGAAAGCCGCCCTC---TGTAAA 116519 |||||| ||||||||| |||| ||||||||||| | ||||| || ||| || ||| Sbjct 13698 TATTTTTTGCTTTATTGATTATGGAATTTCAGGTG--GGAAAACC-ATCTCGGTTGCAAA 13754 Query 116520 TATTAAACAAATT--ATGAAACATTTACTAGATTCAATAAAAAATTATAATTTACAATAT 116577 | || | ||| ||| || || | || | | | ||||| ||||||||||||||| | Sbjct 13755 TTATAGTAATATTAAATGTAA-TTTAATTACAAT-ATTAAAACATTATAATTTACAATTT 13812 Query 116578 ACTGAANNNNNNNNNNNNNNNNNNNTAGCATTAGAATATGAATATATTCAAAATGATATT 116637 || | | | | ||||||||||||||||| |||||||| Sbjct 13813 ACAGGAATAAAATATGATA-------ATCCTTAGAATATGAATATATACAAAATGAAGCG 13865 Query 116638 AAAAGTATAAAGCCTAATAATTTATCTAGAAAAACTTGGAT 116678 ||| ||| || ||| ||||| || |||||||||||| Sbjct 13866 AAACAATTAACTCCAAATTATTTAAATA-AAAAACTTGGAT 13905 >seq461362 Length=56882 Score = 105 bits (116), Expect = 1e-17 Identities = 245/369 (66%), Gaps = 19/369 (5%) Strand=Plus/Plus Query 116407 TTTAAAGATATATGGTTTCCATTGTTTGAACATAAAGATATGTTGATAACTAATGATATT 116466 |||||||||| | ||| ||||||||| |||| |||||||| ||||| |||| || ||| Sbjct 18387 TTTAAAGATACTTAGTT-CCATTGTTTAAACAAAAAGATATATTGATTACTATAGACATT 18445 Query 116467 TTATGCTTTATTCATTACGGAATTTCAG-GGGGCGGAAAGCCGCCCTCTGTAAATATTAA 116525 || | ||||||||| || |||||||||| || || || | | || ||| |||| || | Sbjct 18446 TTCTACTTTATTCACTATGGAATTTCAGAGGTGCAGAGTGTC-ACCACTGAAAATTTTTA 18504 Query 116526 ACAAATTATGAAACATTTACTAGATTCAATAAAAAATTATAAT--TTACAATATACTGAA 116583 | | ||| || ||||| ||| | | ||| ||| |||||||||| ||| Sbjct 18505 AAATGTTA---------CACAAGATTTAATTAGATATTTAAATACTTACAATATAAAGAA 18555 Query 116584 NNNNNNNNNNNNNNNNNNNTAGCATTAGAATATGAATATATTCAAAATGATATTAAAAGT 116643 | || || |||| |||||||| | |||| | ||| Sbjct 18556 ATAAAGTATAATGATCCACTTGCTCTAAAATACGAATATATCCTAAATTAAGCAAAACAA 18615 Query 116644 ATAAAGCCTAATAATTTATCTAGAAAAACTTGGATATTGTTATCTACTAGAAATTTTAAA 116703 |||| || ||||||||| || | |||| || || || | || || ||| |||||| Sbjct 18616 ATAACTCCAAATAATTTAAATAAAGAAACGTGAAT-TTTCCAACTGTTAAAAACTTTAAA 18674 Query 116704 AAA---TTAATATTATCTTTGAGAACTAAAGTAGCTGATGAAATTCGAGATTATTATATA 116760 ||| ||| || | ||| |||||||||| || | ||||| ||| |||||| || Sbjct 18675 AAAAACTTACAATGA-GTTTCCGAACTAAAGTTGCACAGGAAATCAAAGAATATTATGTA 18733 Query 116761 ACTATAGAA 116769 || || ||| Sbjct 18734 ACAATCGAA 18742 >seq956675 Length=8025 Score = 102 bits (112), Expect = 1e-16 Identities = 118/158 (75%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 116605 GCATTAGAATATGAATATATTCAAAATGATATTAAAAGTATAAAGCCTAATAATTTATCT 116664 || ||||| ||||||||||| | | |||| || |||| ||||| || ||| ||||| | Sbjct 1416 GCTTTAGAGTATGAATATATAC-ATATGACATGAAAAATATAACACCAAATCATTTAAGT 1474 Query 116665 AGAAAAACTTGGATATTGTTATCTACTAGAAATTTTAAAAAATTAATATTATCTTTGAGA 116724 |||||||| ||||| ||| || || || |||| | || |||||| || | ||| || Sbjct 1475 AGAAAAACATGGATTTTGATACCTGTTAAAAATATCAAGAAATTATTAATGAGTTTATGA 1534 Query 116725 ACTAAAGTAGCTGATGAAATTCGAGATTATTATATAAC 116762 || || | ||| |||||||| || |||| ||||||| Sbjct 1535 ACGAATTTTGCTAATGAAATTTAAGGTTATCATATAAC 1572 >seq938424 Length=33646 Score = 100 bits (110), Expect = 4e-16 Identities = 132/180 (73%), Gaps = 11/180 (6%) Strand=Plus/Plus Query 116404 TGGTTTAAAGATATATGGTTTCCATTGTTTGAACATAAAGATATGTTGATAACTAATGAT 116463 ||| ||||||| |||||| |||| ||||||||| | || ||||| || || || |||||| Sbjct 9526 TGGATTAAAGAAATATGGATTCCTTTGTTTGAAGAAAAGGATATTTTAATTACAAATGAT 9585 Query 116464 ATTTTATGCTTTATTCATTACGGAATTTCAGGG---GGC--GGAAAGCCGCCCTCTGTAA 116518 ||| |||||||||| | | ||||||||||| || || | ||| || || Sbjct 9586 ATTGTATGCTTTATATACTGACGAATTTCAGGGTTTTGCTTCGAGAACCG-----TGGAA 9640 Query 116519 ATATTAAACAAATTATGAAACATTTACTAGATTCAATAAAAAATTATAATTTACAATATA 116578 |||| |||||||||| | || | || || |||| ||| | ||||| ||| | |||||| Sbjct 9641 ATATAAAACAAATTAGAAGACCTATA-TAAATTCTATATATAATTACAATCTCGAATATA 9699 >seq45895 Length=3554 Score = 87.8 bits (96), Expect = 3e-12 Identities = 131/185 (71%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 ||||||| |||||| | || || |||| ||| || || | |||| | || |||| | Sbjct 1787 AAAATGCTGATATTTGTGAAGACTTTGAGGCAAAAGACAATCAGATTA-AGGTAGAAGCT 1845 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 | |||| ||| ||| | ||| ||||| || ||||||||||||| | ||||| Sbjct 1846 TTGGATACAATTGCAAATATTAAAGCCAAAATCCATCATAAAGAAGGCATTCTCCCAGAT 1905 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 || || ||| ||| | ||| || || ||| | |||||| | |||| || || |||||| Sbjct 1906 CAGCAGAGAAGGATATTTGCTGGAAAACAGTTAGAAGATGGCTGAACATTGTCTGATTAT 1965 Query 156000 AATAT 156004 ||||| Sbjct 1966 AATAT 1970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 719087184187200