Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq32887 109 2e-18
seq116962 89.7 1e-12
seq286372 87.8 5e-12
seq1081620 84.2 6e-11
>seq32887
Length=3497
Score = 109 bits (120), Expect = 2e-18
Identities = 158/222 (71%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 289111 GCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACA 289170
||||| |||||||| || || ||||||| | | | | | | |||| ||||| |||
Sbjct 705 GCTCCTTGACCAACAAGAATCTCGTCAAATTCTGGACCAGCTGCATGAAAGAATGGTACT 646
Query 289171 TTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCT 289230
||||| |||||||| || | ||||||||||| || ||||| || |||||||| |
Sbjct 645 CCAGCTTCACCTGCTACAGCACGTGCCAGAAGTGTTTTTCCTGTGCCTGGTGGTCCAACG 586
Query 289231 AATAGAACTCCCTTTGGTACTTTTGCCCC---AGCAGACTTATATTTCTCAGGGCTCTTT 289287
| ||||||||| || || | ||| | || ||| || | | || || ||| ||||
Sbjct 585 AGTAGAACTCCTTTAGGAAGTTTCCCACCCAAAGCTGA---AAACTTTTCTGGGTTCTTC 529
Query 289288 AAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCA 289329
|| ||||| |||| || | ||||| | |||||| ||||||
Sbjct 528 AAGAATTCGACAACATCTTTTAGTTCTTGTTTTGCTTCATCA 487
>seq116962
Length=305
Score = 89.7 bits (98), Expect = 1e-12
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 303988 TTCTTGGCGATTTTCAGCGGAACGCCTAACTCGCTAATGGATAAGTTGGGGTCAGGTGTA 304047
||| |||| || |||||||||||||| || ||| ||| || || ||||| || |||
Sbjct 45 TTCATGGCAATCTTCAGCGGAACGCCCAATTCGTCAATCATCAAATTCGGGTCCGGCGTA 104
Query 304048 ATTACAGAGCGAGCACTAAAATCAACACGCTTACCCATAAGATTACCCCTAACACGACCG 304107
|| || || ||||| || ||||| || ||||| ||||| | ||| || | || || ||
Sbjct 105 ATCACCGAACGAGCGCTGAAATCCACTCGCTTCCCCATCAAATTTCCTCGCACTCGCCCC 164
Query 304108 CCCTTACCGTTTAGCCTATCCTTGATTGCCTTCAGGGGGCGACC 304151
|||| || || | | | | ||| |||||||| || |||||
Sbjct 165 TCCTTCCCCTTAATTCGCTGTTGGATAGCCTTCAGCGGCCGACC 208
>seq286372
Length=1607
Score = 87.8 bits (96), Expect = 5e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 289114 CCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTT 289173
|||| || ||| ||||||| | ||||||||| |||| ||| |||||| | ||||||
Sbjct 871 CCAACTCCCACAAACATTTCAAGGAATTCAGAACCGGAAACTGTAATGAAAGGCACATTT 812
Query 289174 GCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226
||||| ||||| |||| | ||||| ||||| || || |||||||| || ||
Sbjct 811 GCTTCACCTGCAGTTGCCTTTGCCAGTAGTGTTTTTCCAGTTCCAGGGGGACC 759
>seq1081620
Length=7940
Score = 84.2 bits (92), Expect = 6e-11
Identities = 159/234 (68%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 302602 ATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATA 302661
|||| ||| ||| || ||||| ||||| |||||||| ||||| | |||||||||||
Sbjct 3711 ATATTACCTGTTTCAGCAGTTTTCACAGCAGTATCAATCAGACCTTCTCGACCACCCATG 3770
Query 302662 GCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCA 302721
|| || ||||| | ||| ||| || || | | | | ||| | || ||||||||
Sbjct 3771 GCGTGAAAGAAAAATTCTGAAGGTGTGAGACCGGCTAGATACGAGTTTTCGACGAAACCT 3830
Query 302722 CGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCG 302781
| | ||||| || ||| || |||| ||||| | || | || | | ||
Sbjct 3831 CTGGATTCGGGACCATAGTCATCTTTAATAAAATGTGGTAATGTTCGTTTACGAAAACCA 3890
Query 302782 TATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGC 302835
| || || |||||||| |||||||| || ||||||| || | ||| | ||||
Sbjct 3891 AAGGGTATTCGCTTTCCTTCAACGTTTTGTTGTCCCACACAAGCAATAACCTGC 3944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1445464166818804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |