Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_021777.1 Length=43447 Score E Sequences producing significant alignments: (Bits) Value seq1208580 111 4e-20 >seq1208580 Length=238 Score = 111 bits (122), Expect = 4e-20 Identities = 161/226 (71%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 1120 TGGTGCAGGCATCGACCCACGAGAATGCGCAGTTCCTGCCGCCGGATTACATCAGCTCGC 1179 |||||||||| ||| ||| |||| || ||||||| || |||||| ||||| Sbjct 232 TGGTGCAGGCCAGCACCTTCGACAATGAGCTCAACCTGCCGGACGACTACATCCCCTCGC 173 Query 1180 TGACCGAGACCTACCCGGCACAGTTGATTAACGCGTATCTGAACGGCGAGTTCGTTAACC 1239 ||| ||| ||||||| | ||| |||| | || || || ||||| ||||||| |||| Sbjct 172 TGATGGAGTCCTACCCCGAGCAGCTGATCATGGCCTACCTCGACGGCCAGTTCGTGAACC 113 Query 1240 TGACATCCGGCAGCGTGTATTACGCATACGACCGCCGTAAGC---ACCGCAGCAAAGAGA 1296 |||| || |||| | ||| ||| ||||||||| |||| || ||||| | |||| Sbjct 112 TGACCTCGGGCACGATCTATACCGCCTACGACCGC---AAGCTCAACGGCAGCCAGGAGA 56 Query 1297 CAATTCAACCGGGTGACACGCTGTACATCGGGCAGGACTTCAACGT 1342 | || || || || || |||| | | | ||| |||||||||||| Sbjct 55 CCATCCAGCCCGGGGAGCCGCTCTTCGTGGGGATGGACTTCAACGT 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136603578251336