Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_022988.1 Length=74210 Score E Sequences producing significant alignments: (Bits) Value seq1199610 140 2e-28 >seq1199610 Length=229 Score = 140 bits (154), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 64877 GCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCT 64936 ||| || || || ||||| |||| ||||| |||||||| || ||||| |||||||| Sbjct 228 GCTGGGCGTCAACGTCGACGACCTGCTGGTGTCCCAGCCGGATACCGGCGAACAGGCCCT 169 Query 64937 GGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTC--CATCGTCGTCGTTGACTCT 64994 ||| ||| ||| | || || || | || ||| | || || |||| ||||| Sbjct 168 GGAAATCACCGACATGCTGGTGCGTTCCAAC--GCCGTCGACGTCATCATCGTCGACTCC 111 Query 64995 GTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGC 65054 ||||| || |||||||| |||||| |||||||||| || || |||| ||||| || Sbjct 110 GTGGCCGCGCTGGTGCCCAAGGCCGAGATCGAAGGCGAGATGGGTGACATGCACGTGGGT 51 Query 65055 CTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCAT 65104 ||||| ||||| || ||||| ||||| |||||||| ||||||||| ||| Sbjct 50 CTGCAGGCGCGTCTGATGTCCCAGGCGCTGCGCAAGATCACCGGCAACAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 233304718213852