Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq708045 95.1 9e-15
seq741633 89.7 4e-13
seq831174 86.0 5e-12
>seq708045
Length=25632
Score = 95.1 bits (104), Expect = 9e-15
Identities = 173/252 (69%), Gaps = 1/252 (0%)
Strand=Plus/Plus
Query 107540 TTATAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGT 107599
|||||||| | |||||||| || ||||| || ||||| || || || || || ||| |
Sbjct 10376 TTATAAGAAATC-AAAATGCAGATATTTGTGAAGACTTTGACGGGGAAGACTATCACCTT 10434
Query 107600 CGAAACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGG 107659
|| || ||| ||||| | | | || ||| || || |||||||||||
Sbjct 10435 AGAGGTAGAAGCTTCGGATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGG 10494
Query 107660 CGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAAC 107719
| ||| ||||||||||||||| || | ||| || || ||| |||| || | | |||
Sbjct 10495 AATTCCCCCGGATCAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAAC 10554
Query 107720 AATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGG 107779
| || | || || || || || || || ||||| || ||| | ||||| ||| | || ||
Sbjct 10555 ATTGTCTGATTATAATATCCAGAAAGAATCTACTTTACACCTTGTGTTAAGACTCCGTGG 10614
Query 107780 GGGAAATAATAA 107791
||| ||| ||
Sbjct 10615 TGGAGCTAAGAA 10626
>seq741633
Length=11487
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || || || || |||| || |||||||| || | ||| |||||
Sbjct 8127 ATGCAGATATTCGTTAAGACACTAACTGGTAAAACCATCACATTGGAAGTAGAGGCATCT 8186
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | || || || ||| ||||| ||||| | || ||||||
Sbjct 8187 GATACAATTGAGAATGTGAAGGCGAAAATTCAGGATAAGGAAGGGATCCCACCTGATCAG 8246
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|||||||| |||| ||| || ||||| || || || | | ||| | | || |||||
Sbjct 8247 CAGAGACTGATTTTTGCTGGCAAACAACTCGAAGATGGGAGAACTCTATCTGATTACAAT 8306
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| ||||| ||||| ||||| |||| ||||| ||||| || ||
Sbjct 8307 ATTCAGAAGGAATCTACCCTGCACCTGGTATTGAGGTTGCGTGGTGG 8353
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| |||||||| || || | || ||||| || |||||| | || || |||
Sbjct 9552 ATGCAGATTTTTGTGAAGACCCTTACTGGCAAGACAATTACCCTGGAGGTAGAAGCTTCA 9611
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| ||| | | | || || |||||| || || |||||| | || || |||
Sbjct 9612 GACACTATTGAAAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAG 9671
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || || | ||| ||||| || ||||| || | ||| || |||| ||||||
Sbjct 9672 CAGCGTCTCATCTTTGCTGGTAAGCAACTGGAAGATGGACGAACCCTGTCGGATTACAAC 9731
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| ||||| ||||| ||||| ||||| |||| |||| || ||
Sbjct 9732 ATTCAGAAGGAATCTACTTTGCATCTGGTGCTGAGGCTGCGTGGTGG 9778
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || ||||| ||||| || || || ||||| ||||| | ||| || || |
Sbjct 10008 ATGCAGATATTTGTGAAAACCTTGACTGGAAAAACTATTACATTAGAAGTAGAAGCATCC 10067
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | |||||| ||||| |||||||||||| | || || |||
Sbjct 10068 GATACCATAGAGAATGTAAAAGCGAAGATCCAGGATAAAGAAGGCATTCCGCCAGACCAG 10127
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|||||| | || | ||| || || |||||||| || | || || | || || ||
Sbjct 10128 CAGAGATTGATCTTTGCAGGAAAGCAGCTGGAAGATGGGCGGACCTTGTCTGATTATAAT 10187
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| ||||| ||||| |||| | || |||| ||||| || ||
Sbjct 10188 ATTCAGAAGGAATCTACTCTGCATCTTGTCCTGAGGTTGCGTGGTGG 10234
Score = 84.2 bits (92), Expect = 2e-11
Identities = 163/240 (68%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 107543 TAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGA 107602
|||||||| || ||||||||||||| || || | || |||||||| ||||| | ||
Sbjct 10453 TAAGAGGTGGAA--TGCAAATTTTTGTGAAGACACTTACTGGCAAAACAATTACATTGGA 10510
Query 107603 AACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGT 107662
| ||||| || || | | | || ||| |||||| |||||||||||| |
Sbjct 10511 AGTTGAGGCATCTGACACAATTGAAAATGTGAAAGCTAAGATTCAAGATAAAGAAGGCAT 10570
Query 107663 GCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAAT 107722
|| || || ||| | || || | ||| || || ||||| || || | | || |
Sbjct 10571 CCCTCCAGACCAACAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGAAGGACCTT 10630
Query 107723 GGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
| || ||||||||||| ||||| || || ||||| | ||| |||| |||| || ||
Sbjct 10631 ATCTGATTACAACATTCAGAAGGAATCCACTTTGCATTTAGTGCTGAGGCTGCGTGGAGG 10690
>seq831174
Length=18794
Score = 86.0 bits (94), Expect = 5e-12
Identities = 171/252 (68%), Gaps = 1/252 (0%)
Strand=Plus/Plus
Query 107540 TTATAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGT 107599
|||||||| | |||||||| || ||||| || | ||| || || || || || ||| |
Sbjct 4096 TTATAAGAAATC-AAAATGCAGATATTTGTGAAGAATTTGACGGGGAAGACTATCACCTT 4154
Query 107600 CGAAACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGG 107659
|| || ||| ||||| | | | || || || || |||||||||||
Sbjct 4155 AGAGGTAGAAGCTTCGGATACAATTGAAAATGTTAATGCCAAAATCCAGGATAAAGAAGG 4214
Query 107660 CGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAAC 107719
| ||| ||||||||||||||| || | ||| || || ||| |||| || | | |||
Sbjct 4215 AATTCCCACGGATCAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAAC 4274
Query 107720 AATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGG 107779
| || | || || || || || || | ||||| || ||| | ||||||||| | || ||
Sbjct 4275 ATTGTCTGATTATAATATCCAGAAATAATCTACTTTACACCTTGTGTTGAGACTCCGTGG 4334
Query 107780 GGGAAATAATAA 107791
||| ||| ||
Sbjct 4335 TGGAGCTAAGAA 4346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 392083156767988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |