Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq302910 127 3e-24 seq741633 114 2e-20 seq708045 109 8e-19 seq1341392 104 4e-17 seq302911 102 1e-16 seq303400 96.9 5e-15 seq831174 89.7 8e-13 seq410871 89.7 8e-13 seq45895 86.0 1e-11 >seq302910 Length=12142 Score = 127 bits (140), Expect = 3e-24 Identities = 155/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| || | || ||||||||||| |||||||| || | || || ||| ||| | Sbjct 4191 TGCAAATTTTTGTCAAGACATTAACAGGTAAAACAATAACACTGGAAGTTGAACCATCA- 4133 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||||||| ||||||| || ||||| ||| |||||||| |||||||| || || Sbjct 4132 GATACTATTGAAAATGTGAAGGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGACCAG 4073 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || || || |||||||| || |||||||| || ||| | || ||| | || || ||| Sbjct 4072 CAGAGGCTTATTTTTGCTGGAAAACAATTGGAAGATGGGCGTACTTTATCTGACTACAAT 4013 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGT 146239 || || ||||| || || | ||||| || Sbjct 4012 ATTCAGAAAGAGTCCACATTACATTTGGT 3984 Score = 111 bits (122), Expect = 2e-19 Identities = 140/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 |||| || || ||||||| | ||||| |||||||| || | || || || | || | Sbjct 11338 TGCAGATTTTTGTAAAAACTCTGACAGGGAAAACAATAACATTGGAAGTTGAGCCATCA- 11280 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| ||||||||||| ||||| ||| |||||||| || || || |||||| Sbjct 11279 GACACAATTGAAAATGTAAAAGCAAAAATTCAAGACAAAGAAGGAATACCGCCAGATCAA 11220 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || || | || ||||| ||||||||| | || ||| ||||| | ||||||| || Sbjct 11219 CAGCGATTAATCTTTGCTGGTAAACAACTTGAGGATGGAAGAACTCTCTCAGATTACAAC 11160 Query 146211 ATACAAAAAG 146220 |||||||||| Sbjct 11159 ATACAAAAAG 11150 >seq741633 Length=11487 Score = 114 bits (126), Expect = 2e-20 Identities = 161/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || | || || || ||||||||| | || || ||| | | Sbjct 10237 TGCAGATTTTTGTGAAGACTCTTACTGGCAAGACAATTACTCTGGAGGTGGAAGCTTCTG 10296 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| ||| || || ||| || ||||||||||| || ||||||| Sbjct 10297 ACACCATTGAGAATGTCAAAGCAAAGATCCAAGACAAGGAAGGCATTCCTCCAGATCAAC 10356 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||||| |||||||| ||||| || || ||| || || ||| ||||||| || | Sbjct 10357 AGCGACTCATCTTTGCAGGAAAACAGTTGGAAGATGGAAGGACCTTATCAGATTACAACA 10416 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||| ||||| ||| | ||||| || | | ||||||| || Sbjct 10417 TCCAAAAGGAATCTACTCTGCATTTGGTTCTGAGGCTAAGAGGTGG 10462 Score = 114 bits (126), Expect = 2e-20 Identities = 161/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || | || || || || |||||| | || || ||| | || Sbjct 11149 TGCAGATTTTTGTGAAGACTCTTACCGGGAAGACCATTACTCTGGAGGTGGAAGCTTCCG 11208 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| || ||||| ||| ||| ||||||||||| || ||||||| Sbjct 11209 ACACAATTGAGAATGTGAAGGCGAAAATCCAAGATAAGGAAGGCATTCCCCCAGATCAAC 11268 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||||| |||||||| ||||| || || ||| | || | | || ||||||| Sbjct 11269 AGCGACTCATCTTTGCAGGCAAACAGTTGGAAGATGGACGTACACTTTCGGACTATAATA 11328 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || |||||||| ||| | ||||| || |||| || ||||| || Sbjct 11329 TTCAGAAAGAATCCACTCTTCATTTGGTGCTACGTTTGAGAGGTGG 11374 Score = 109 bits (120), Expect = 8e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||| ||||| | ||||| || || |||||||| ||||| | || |||||| ||| | Sbjct 10009 TGCAGATATTTGTGAAAACCTTGACTGGAAAAACTATTACATTAGAAGTAGAAGCATC-C 10067 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| || | ||||||||| || || || ||||||||||||||| || || || Sbjct 10068 GATACCATAGAGAATGTAAAAGCGAAGATCCAGGATAAAGAAGGCATTCCGCCAGACCAG 10127 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || ||| | || |||||||| || || | || ||| | || || | ||||||||| Sbjct 10128 CAGAGATTGATCTTTGCAGGAAAGCAGCTGGAAGATGGGCGGACCTTGTCTGATTATAAT 10187 Query 146211 ATACAAAAAGAATCGACTATCCAT 146234 || || || ||||| ||| | ||| Sbjct 10188 ATTCAGAAGGAATCTACTCTGCAT 10211 Score = 104 bits (114), Expect = 4e-17 Identities = 150/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090 ||||||| || | || ||| | || || ||||||||||| | || || || ||| Sbjct 10465 TGCAAATTTTTGTGAAGACACTTACTGGCAAAACAATTACATTGGAAGTTGAGGCAT-CT 10523 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| ||||||| ||| ||| || ||| |||||||||||| || || || ||| Sbjct 10524 GACACAATTGAAAATGTGAAAGCTAAGATTCAAGATAAAGAAGGCATCCCTCCAGACCAA 10583 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || | ||||| ||||| || || || | || ||| || || ||| | ||||| || Sbjct 10584 CAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGAAGGACCTTATCTGATTACAAC 10643 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGT 146239 || || || ||||| ||| | |||||||| Sbjct 10644 ATTCAGAAGGAATCCACTTTGCATTTAGT 10672 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || |||| || | ||||| || || || || | || || ||| | | Sbjct 8641 TGCAGATTTTTGTAAAGACCCTCACAGGCAAGACCATCACACTGGAAGTGGAAGCTTCAG 8700 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| || || || || |||||||| |||||||| || || | Sbjct 8701 ACACAATTGAAAATGTGAAGGCAAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAGC 8760 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||||||||| ||||| || | || ||| | || | | ||||| |||| Sbjct 8761 AACGTCTCATTTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACTCTGTCTGATTACAATA 8820 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || || ||||||||| ||||| | || || | || ||||||||| Sbjct 8821 TTCAGAAGGAATCGACTCTCCATCTGGTGTTGAGGTTGCGAGGAGGTA 8868 >seq708045 Length=25632 Score = 109 bits (120), Expect = 8e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || || || || || || || || || | || |||||| | | Sbjct 10392 TGCAGATATTTGTGAAGACTTTGACGGGGAAGACTATCACCTTAGAGGTAGAAGCTTCGG 10451 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||||| || ||||||||| ||||| || ||||| | Sbjct 10452 ATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGGAATTCCCCCGGATCAGC 10511 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| || ||||| || || || || || ||| |||| || | |||||||||| Sbjct 10512 AGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAACATTGTCTGATTATAATA 10571 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 | || |||||||| ||| | || | || ||| || Sbjct 10572 TCCAGAAAGAATCTACTTTACACCTTGTGTTAAGA 10606 >seq1341392 Length=603 Score = 104 bits (114), Expect = 4e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||| ||||| |||| || | ||||| || || || || | || || ||| | | | Sbjct 282 TGCAGATATTTGTAAAGACCCTCACAGGCAAGACCATAACATTGGAAGTTGAAGCCTCA- 340 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || ||||| ||||||| || || || || ||| |||||||||||||| |||||| Sbjct 341 GACACTATAGAAAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCACCAGATCAA 400 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || || || || || ||||| || ||| | || ||| | | || | | ||||| || Sbjct 401 CAGAGGCTGATCTTCGCAGGGAAGCAACTCGAAGATGGTCGTACACTGTCTGATTACAAC 460 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || || || ||||| || ||||||| ||| || |||| ||||| |||| Sbjct 461 ATTCAGAAGGAATCTACCCTCCATTTGGTACTAAGATTGAGAGGTGGTA 509 >seq302911 Length=9965 Score = 102 bits (112), Expect = 1e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | ||||| || || || |||||||| || | || || || | | Sbjct 1012 TGCAAATATTTGTGAAAACGTTGACTGGCAAAACAATAACATTAGAAGTTGAGCCGTCAG 953 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||| ||| || || || |||||||||||||||||| || || | Sbjct 952 ACACAATAGAAAATGTCAAAGCAAAGATTCAGGATAAAGAAGGCATTCCACCAGACCAGC 893 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || ||||||||||| ||||| || || ||| | || | ||||||| |||| Sbjct 892 AGAGGCTAATTTTTGCAGGGAAACAGTTGGAAGATGGACGGACTCTGTCAGATTACAATA 833 Query 146212 TACAAAAAG 146220 |||| |||| Sbjct 832 TACAGAAAG 824 >seq303400 Length=5017 Score = 96.9 bits (106), Expect = 5e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || || || || ||||| || || || | || |||||| | | Sbjct 4830 TGCAGATATTTGTGAAGACTTTGACGGGAAAGACTATCACCTTAGAGGTAGAAGCTTCGG 4889 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||||| || ||||||||| ||||| | ||||| | Sbjct 4890 ATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGGAATTCCCACGGATCAGC 4949 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| || ||||| || || || || || ||| |||| || | |||||||||| Sbjct 4950 AGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAACATTGTCTGATTATAATA 5009 Query 146212 TACAAAAA 146219 | || ||| Sbjct 5010 TCCAGAAA 5017 >seq831174 Length=18794 Score = 89.7 bits (98), Expect = 8e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || | || || || || || || || | || |||||| | | Sbjct 4112 TGCAGATATTTGTGAAGAATTTGACGGGGAAGACTATCACCTTAGAGGTAGAAGCTTCGG 4171 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| || ||||| || ||||||||| ||||| | ||||| | Sbjct 4172 ATACAATTGAAAATGTTAATGCCAAAATCCAGGATAAAGAAGGAATTCCCACGGATCAGC 4231 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| || ||||| || || || || || ||| |||| || | |||||||||| Sbjct 4232 AGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAACATTGTCTGATTATAATA 4291 Query 146212 TACAAAAAGAATCGACT 146228 | || ||| |||| ||| Sbjct 4292 TCCAGAAATAATCTACT 4308 >seq410871 Length=20256 Score = 89.7 bits (98), Expect = 8e-13 Identities = 121/166 (73%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 32499 TGattttttaattcattctttagatctactatatctttct-taaattttatttcattata 32557 |||||||| ||||| | | || | | || | ||||| | ||| || |||| || ||| Sbjct 2951 TGATTTTTAAATTCTATTTCAAGTTGTTCTTTTTCTTTATGTAACTTATATT-CACCATA 2893 Query 32558 attttttattGATGGTAATACATCTGCTCGTATCCATTTTTTAAAATGTTTGGATACTTG 32617 ||| | |||||||| |||||||| | || |||||||||||| | ||| | | |||| Sbjct 2892 TTTTCTAATTGATGGCAATACATCACTTGTTACCCATTTTTTAAATTTTTTAGCTTCTTG 2833 Query 32618 ATCCTTTGATGATTTTATTAATGAATATACTGCTATTTCATTAATA 32663 | || |||||| ||||||||||||| | | |||||||||| Sbjct 2832 TTTTTTAGATGATAAAATTAATGAATATAATCCAGATTCATTAATA 2787 >seq45895 Length=3554 Score = 86.0 bits (94), Expect = 1e-11 Identities = 132/187 (71%), Gaps = 1/187 (1%) Strand=Plus/Plus Query 146060 AAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAATAAAAT 146119 ||| ||||| | ||| | |||||| | ||||| ||| |||| | ||| ||||| Sbjct 1819 AAAGACAATCAG-ATTAAGGTAGAAGCTTTGGATACAATTGCAAATATTAAAGCCAAAAT 1877 Query 146120 ACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATT 146179 || | |||||||||||||| || ||||| || ||| || ||||| || ||||| || Sbjct 1878 CCATCATAAAGAAGGCATTCTCCCAGATCAGCAGAGAAGGATATTTGCTGGAAAACAGTT 1937 Query 146180 AGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGT 146239 ||| ||| |||| || | ||||||||||| ||||| ||| ||| | || | || Sbjct 1938 AGAAGATGGCTGAACATTGTCTGATTATAATATCAAAAAATAATTTACTTTACACCTTGT 1997 Query 146240 ATTACGA 146246 ||| || Sbjct 1998 GTTAAGA 2004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 772433134316640