Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq302910 127 3e-24
seq741633 114 2e-20
seq708045 109 8e-19
seq1341392 104 4e-17
seq302911 102 1e-16
seq303400 96.9 5e-15
seq831174 89.7 8e-13
seq410871 89.7 8e-13
seq45895 86.0 1e-11
>seq302910
Length=12142
Score = 127 bits (140), Expect = 3e-24
Identities = 155/209 (74%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090
||||||| || | || ||||||||||| |||||||| || | || || ||| ||| |
Sbjct 4191 TGCAAATTTTTGTCAAGACATTAACAGGTAAAACAATAACACTGGAAGTTGAACCATCA- 4133
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
||||||||| ||||||| || ||||| ||| |||||||| |||||||| || ||
Sbjct 4132 GATACTATTGAAAATGTGAAGGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGACCAG 4073
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|| || || |||||||| || |||||||| || ||| | || ||| | || || |||
Sbjct 4072 CAGAGGCTTATTTTTGCTGGAAAACAATTGGAAGATGGGCGTACTTTATCTGACTACAAT 4013
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGT 146239
|| || ||||| || || | ||||| ||
Sbjct 4012 ATTCAGAAAGAGTCCACATTACATTTGGT 3984
Score = 111 bits (122), Expect = 2e-19
Identities = 140/190 (74%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090
|||| || || ||||||| | ||||| |||||||| || | || || || | || |
Sbjct 11338 TGCAGATTTTTGTAAAAACTCTGACAGGGAAAACAATAACATTGGAAGTTGAGCCATCA- 11280
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
|| || ||| ||||||||||| ||||| ||| |||||||| || || || ||||||
Sbjct 11279 GACACAATTGAAAATGTAAAAGCAAAAATTCAAGACAAAGAAGGAATACCGCCAGATCAA 11220
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|| || | || ||||| ||||||||| | || ||| ||||| | ||||||| ||
Sbjct 11219 CAGCGATTAATCTTTGCTGGTAAACAACTTGAGGATGGAAGAACTCTCTCAGATTACAAC 11160
Query 146211 ATACAAAAAG 146220
||||||||||
Sbjct 11159 ATACAAAAAG 11150
>seq741633
Length=11487
Score = 114 bits (126), Expect = 2e-20
Identities = 161/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | || || | || || || ||||||||| | || || ||| | |
Sbjct 10237 TGCAGATTTTTGTGAAGACTCTTACTGGCAAGACAATTACTCTGGAGGTGGAAGCTTCTG 10296
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| | ||||| ||| || || ||| || ||||||||||| || |||||||
Sbjct 10297 ACACCATTGAGAATGTCAAAGCAAAGATCCAAGACAAGGAAGGCATTCCTCCAGATCAAC 10356
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| ||||||| |||||||| ||||| || || ||| || || ||| ||||||| || |
Sbjct 10357 AGCGACTCATCTTTGCAGGAAAACAGTTGGAAGATGGAAGGACCTTATCAGATTACAACA 10416
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| ||||| ||||| ||| | ||||| || | | ||||||| ||
Sbjct 10417 TCCAAAAGGAATCTACTCTGCATTTGGTTCTGAGGCTAAGAGGTGG 10462
Score = 114 bits (126), Expect = 2e-20
Identities = 161/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | || || | || || || || |||||| | || || ||| | ||
Sbjct 11149 TGCAGATTTTTGTGAAGACTCTTACCGGGAAGACCATTACTCTGGAGGTGGAAGCTTCCG 11208
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| | ||||| || ||||| ||| ||| ||||||||||| || |||||||
Sbjct 11209 ACACAATTGAGAATGTGAAGGCGAAAATCCAAGATAAGGAAGGCATTCCCCCAGATCAAC 11268
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| ||||||| |||||||| ||||| || || ||| | || | | || |||||||
Sbjct 11269 AGCGACTCATCTTTGCAGGCAAACAGTTGGAAGATGGACGTACACTTTCGGACTATAATA 11328
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || |||||||| ||| | ||||| || |||| || ||||| ||
Sbjct 11329 TTCAGAAAGAATCCACTCTTCATTTGGTGCTACGTTTGAGAGGTGG 11374
Score = 109 bits (120), Expect = 8e-19
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090
|||| ||||| | ||||| || || |||||||| ||||| | || |||||| ||| |
Sbjct 10009 TGCAGATATTTGTGAAAACCTTGACTGGAAAAACTATTACATTAGAAGTAGAAGCATC-C 10067
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
||||| || | ||||||||| || || || ||||||||||||||| || || ||
Sbjct 10068 GATACCATAGAGAATGTAAAAGCGAAGATCCAGGATAAAGAAGGCATTCCGCCAGACCAG 10127
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|| ||| | || |||||||| || || | || ||| | || || | |||||||||
Sbjct 10128 CAGAGATTGATCTTTGCAGGAAAGCAGCTGGAAGATGGGCGGACCTTGTCTGATTATAAT 10187
Query 146211 ATACAAAAAGAATCGACTATCCAT 146234
|| || || ||||| ||| | |||
Sbjct 10188 ATTCAGAAGGAATCTACTCTGCAT 10211
Score = 104 bits (114), Expect = 4e-17
Identities = 150/209 (72%), Gaps = 2/209 (1%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090
||||||| || | || ||| | || || ||||||||||| | || || || |||
Sbjct 10465 TGCAAATTTTTGTGAAGACACTTACTGGCAAAACAATTACATTGGAAGTTGAGGCAT-CT 10523
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
|| || ||| ||||||| ||| ||| || ||| |||||||||||| || || || |||
Sbjct 10524 GACACAATTGAAAATGTGAAAGCTAAGATTCAAGATAAAGAAGGCATCCCTCCAGACCAA 10583
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|| | ||||| ||||| || || || | || ||| || || ||| | ||||| ||
Sbjct 10584 CAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGAAGGACCTTATCTGATTACAAC 10643
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGT 146239
|| || || ||||| ||| | ||||||||
Sbjct 10644 ATTCAGAAGGAATCCACTTTGCATTTAGT 10672
Score = 91.5 bits (100), Expect = 2e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || |||| || | ||||| || || || || | || || ||| | |
Sbjct 8641 TGCAGATTTTTGTAAAGACCCTCACAGGCAAGACCATCACACTGGAAGTGGAAGCTTCAG 8700
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| ||||||| || || || || |||||||| |||||||| || || |
Sbjct 8701 ACACAATTGAAAATGTGAAGGCAAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAGC 8760
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | ||||||||||| ||||| || | || ||| | || | | ||||| ||||
Sbjct 8761 AACGTCTCATTTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACTCTGTCTGATTACAATA 8820
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || || ||||||||| ||||| | || || | || |||||||||
Sbjct 8821 TTCAGAAGGAATCGACTCTCCATCTGGTGTTGAGGTTGCGAGGAGGTA 8868
>seq708045
Length=25632
Score = 109 bits (120), Expect = 8e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| ||||| | || || || || || || || || || | || |||||| | |
Sbjct 10392 TGCAGATATTTGTGAAGACTTTGACGGGGAAGACTATCACCTTAGAGGTAGAAGCTTCGG 10451
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| ||||||| ||| ||||| || ||||||||| ||||| || ||||| |
Sbjct 10452 ATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGGAATTCCCCCGGATCAGC 10511
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| ||||| || ||||| || || || || || ||| |||| || | ||||||||||
Sbjct 10512 AGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAACATTGTCTGATTATAATA 10571
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246
| || |||||||| ||| | || | || ||| ||
Sbjct 10572 TCCAGAAAGAATCTACTTTACACCTTGTGTTAAGA 10606
>seq1341392
Length=603
Score = 104 bits (114), Expect = 4e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090
|||| ||||| |||| || | ||||| || || || || | || || ||| | | |
Sbjct 282 TGCAGATATTTGTAAAGACCCTCACAGGCAAGACCATAACATTGGAAGTTGAAGCCTCA- 340
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
|| ||||| ||||||| || || || || ||| |||||||||||||| ||||||
Sbjct 341 GACACTATAGAAAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCACCAGATCAA 400
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|| || || || || ||||| || ||| | || ||| | | || | | ||||| ||
Sbjct 401 CAGAGGCTGATCTTCGCAGGGAAGCAACTCGAAGATGGTCGTACACTGTCTGATTACAAC 460
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
|| || || ||||| || ||||||| ||| || |||| ||||| ||||
Sbjct 461 ATTCAGAAGGAATCTACCCTCCATTTGGTACTAAGATTGAGAGGTGGTA 509
>seq302911
Length=9965
Score = 102 bits (112), Expect = 1e-16
Identities = 136/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||||||||| | ||||| || || || |||||||| || | || || || | |
Sbjct 1012 TGCAAATATTTGTGAAAACGTTGACTGGCAAAACAATAACATTAGAAGTTGAGCCGTCAG 953
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || ||||||| ||| || || || |||||||||||||||||| || || |
Sbjct 952 ACACAATAGAAAATGTCAAAGCAAAGATTCAGGATAAAGAAGGCATTCCACCAGACCAGC 893
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || || ||||||||||| ||||| || || ||| | || | ||||||| ||||
Sbjct 892 AGAGGCTAATTTTTGCAGGGAAACAGTTGGAAGATGGACGGACTCTGTCAGATTACAATA 833
Query 146212 TACAAAAAG 146220
|||| ||||
Sbjct 832 TACAGAAAG 824
>seq303400
Length=5017
Score = 96.9 bits (106), Expect = 5e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| ||||| | || || || || ||||| || || || | || |||||| | |
Sbjct 4830 TGCAGATATTTGTGAAGACTTTGACGGGAAAGACTATCACCTTAGAGGTAGAAGCTTCGG 4889
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| ||||||| ||| ||||| || ||||||||| ||||| | ||||| |
Sbjct 4890 ATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGGAATTCCCACGGATCAGC 4949
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| ||||| || ||||| || || || || || ||| |||| || | ||||||||||
Sbjct 4950 AGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAACATTGTCTGATTATAATA 5009
Query 146212 TACAAAAA 146219
| || |||
Sbjct 5010 TCCAGAAA 5017
>seq831174
Length=18794
Score = 89.7 bits (98), Expect = 8e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| ||||| | || | || || || || || || || | || |||||| | |
Sbjct 4112 TGCAGATATTTGTGAAGAATTTGACGGGGAAGACTATCACCTTAGAGGTAGAAGCTTCGG 4171
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| ||||||| || ||||| || ||||||||| ||||| | ||||| |
Sbjct 4172 ATACAATTGAAAATGTTAATGCCAAAATCCAGGATAAAGAAGGAATTCCCACGGATCAGC 4231
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| ||||| || ||||| || || || || || ||| |||| || | ||||||||||
Sbjct 4232 AGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAACATTGTCTGATTATAATA 4291
Query 146212 TACAAAAAGAATCGACT 146228
| || ||| |||| |||
Sbjct 4292 TCCAGAAATAATCTACT 4308
>seq410871
Length=20256
Score = 89.7 bits (98), Expect = 8e-13
Identities = 121/166 (73%), Gaps = 2/166 (1%)
Strand=Plus/Minus
Query 32499 TGattttttaattcattctttagatctactatatctttct-taaattttatttcattata 32557
|||||||| ||||| | | || | | || | ||||| | ||| || |||| || |||
Sbjct 2951 TGATTTTTAAATTCTATTTCAAGTTGTTCTTTTTCTTTATGTAACTTATATT-CACCATA 2893
Query 32558 attttttattGATGGTAATACATCTGCTCGTATCCATTTTTTAAAATGTTTGGATACTTG 32617
||| | |||||||| |||||||| | || |||||||||||| | ||| | | ||||
Sbjct 2892 TTTTCTAATTGATGGCAATACATCACTTGTTACCCATTTTTTAAATTTTTTAGCTTCTTG 2833
Query 32618 ATCCTTTGATGATTTTATTAATGAATATACTGCTATTTCATTAATA 32663
| || |||||| ||||||||||||| | | ||||||||||
Sbjct 2832 TTTTTTAGATGATAAAATTAATGAATATAATCCAGATTCATTAATA 2787
>seq45895
Length=3554
Score = 86.0 bits (94), Expect = 1e-11
Identities = 132/187 (71%), Gaps = 1/187 (1%)
Strand=Plus/Plus
Query 146060 AAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAATAAAAT 146119
||| ||||| | ||| | |||||| | ||||| ||| |||| | ||| |||||
Sbjct 1819 AAAGACAATCAG-ATTAAGGTAGAAGCTTTGGATACAATTGCAAATATTAAAGCCAAAAT 1877
Query 146120 ACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATT 146179
|| | |||||||||||||| || ||||| || ||| || ||||| || ||||| ||
Sbjct 1878 CCATCATAAAGAAGGCATTCTCCCAGATCAGCAGAGAAGGATATTTGCTGGAAAACAGTT 1937
Query 146180 AGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGT 146239
||| ||| |||| || | ||||||||||| ||||| ||| ||| | || | ||
Sbjct 1938 AGAAGATGGCTGAACATTGTCTGATTATAATATCAAAAAATAATTTACTTTACACCTTGT 1997
Query 146240 ATTACGA 146246
||| ||
Sbjct 1998 GTTAAGA 2004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 772433134316640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |