Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq705761 452 5e-122 seq259166 414 1e-110 seq287215 295 9e-75 seq153419 181 1e-40 seq782681 170 2e-37 seq577127 156 5e-33 seq408579 156 5e-33 seq1240356 123 3e-23 seq665253 98.7 1e-15 seq24346 96.9 4e-15 seq1052730 95.1 2e-14 seq1038094 84.2 3e-11 >seq705761 Length=1511 Score = 452 bits (500), Expect = 5e-122 Identities = 343/405 (85%), Gaps = 0/405 (0%) Strand=Plus/Minus Query 157789 TTTAATTCAATTTGATCAAGCATATTTTTATGGATGTTTAAAACGTAAAAGAGAAATTTT 157848 ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct 1101 TTTTATTCAATTTGATCAAGCATATTTTTATGGTTGTTTAAAACGTAAAAGAGAAGTTTT 1042 Query 157849 AATTAAAAAGAAGATTTCACCTCAAGATTACTTTTATGCAAAGATTACTAAAAAAGGGTG 157908 ||||| ||||| |||||| | |||||||||||||||| ||||| |||||| | ||||| Sbjct 1041 GATTAAGAAGAATATTTCAACAGAAGATTACTTTTATGCTAAGATAACTAAAGAGGGGTG 982 Query 157909 GGAAGAAAGCAATGAGAGTTATAGTAGAGCTAAAATTCTTATAAAATCTGACTGGGTTAA 157968 | ||||||| |||| |||||| | ||||||||||||||||||||| ||||||| || Sbjct 981 GAAAGAAAGTAATGCAAGTTATTGCTGAGCTAAAATTCTTATAAAATTAGACTGGGCCAA 922 Query 157969 GTCAAATGTTACAAAATTTGTTGATAAATATGACAAGGAGAATGCAAGTACACAAATTAT 158028 ||||||| ||||||||||| |||||||||| || ||| ||| | | || || || Sbjct 921 GTCAAATATTACAAAATTTATTGATAAATACGAGAAGAAGAGTAAGAATAATACAACAAT 862 Query 158029 TTTGAAAGAAGCTCCACCTATTTTGAAGTTAGAAGAACACGAGAAGTTTCGTGATGACAC 158088 ||| | |||||||||| |||||| |||| ||||| ||||||||||||||||||||| | Sbjct 861 TTTAAGGGAAGCTCCACTTATTTTAGAGTTGGAAGATCACGAGAAGTTTCGTGATGACGC 802 Query 158089 TGGTAATTTATTTGAAGTTGAAGTAAGAGGAGTCAGAGAAGAGGACAAAATATATTTTAA 158148 ||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 801 AGGTAACTTATTTGAAGTTGAAGTGAGAGGAGTCAGAGAAGAGGATAAAATATATTTTAA 742 Query 158149 AGCTATCGACATTGAAAAACTATTTGAAATGGACAATCTAATAAG 158193 |||| | ||||||||| | ||||||||||| ||| ||||||| Sbjct 741 GGCTACTCATATTGAAAAATTGTTTGAAATGGAAAATTTAATAAG 697 >seq259166 Length=12937 Score = 414 bits (458), Expect = 1e-110 Identities = 349/425 (82%), Gaps = 9/425 (2%) Strand=Plus/Minus Query 157789 TTTAATTCAATTTGATCAAGCATATTTTTATGGATGTTTAAAACGTAAAAGAGAAATTTT 157848 ||| ||||||||||||||||| | ||||||||| ||||||||||||||||||||| |||| Sbjct 11703 TTTTATTCAATTTGATCAAGCTT-TTTTTATGGTTGTTTAAAACGTAAAAGAGAAGTTTT 11645 Query 157849 AATTAAAAAGAAGATTTCACCTCAAGATTACTTTTATGCAAAGATTACTAAAAAAGGGTG 157908 ||||||||||| ||| || ||||||||||| |||| ||||||||||| || Sbjct 11644 GATTAAAAAGAATATTAATAAGTGTGACTACTTTTATGCCAAGACAACTAAAAAAGGATG 11585 Query 157909 GGAAGAAAGCAATGAGAGTTATAGTAGAGCTAAAATTCTTATAAAATCTGACTGGGTTAA 157968 ||||||||| |||| |||||||||||||||||||| ||||||||| | ||||||| || Sbjct 11584 GGAAGAAAGTAATGCAAGTTATAGTAGAGCTAAAATACTTATAAAACCAGACTGGGCCAA 11525 Query 157969 GTCAAATGTTACAAAATTTGTTGATAAATATGACAAGGAGAATGCA-AGTACACAAATTA 158027 ||| |||||||| ||| || |||||||| | || ||| ||| | |||| |||| Sbjct 11524 GTCGAATGTTACTAAAGTTATTGATAAACACGAGAAGAAGAGTAAGTAGTATACAACAC- 11466 Query 158028 TTTTGAAAGAAGCTCCACCTATTTTGAAGTTAGAAGAACACGAGAAGTTTCGTGATGACA 158087 |||| | ||| |||||||||||||| |||| ||||||||||||||| || |||||||| Sbjct 11465 TTTTAAGGGAATCTCCACCTATTTTGGAGTTGGAAGAACACGAGAAGATTTGTGATGACG 11406 Query 158088 CTGGTAATTTATTTGAAGTTGAAGTAAGAGGAGTCAGAGAAGAGGACAAAATATATTTTA 158147 | ||||| || ||||||||||||||||||||||||||||||||| | |||||||| |||| Sbjct 11405 CAGGTAACTTGTTTGAAGTTGAAGTAAGAGGAGTCAGAGAAGAGAATAAAATATACTTTA 11346 Query 158148 AAGCTATCGACATTGAAAAACTATTTGAAATGGACAATCTAATAAGGCATAATATTAAAA 158207 |||||||||| || |||||| ||||| ||||| |||||||| | ||||| || || Sbjct 11345 AAGCTATCGATATCGAAAAATTATTTCAAATGAACAATCTAGT------TAATAGTATAA 11292 Query 158208 GATTA 158212 ||||| Sbjct 11291 GATTA 11287 >seq287215 Length=1130 Score = 295 bits (326), Expect = 9e-75 Identities = 240/291 (82%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 118786 ATGGTAAATGTTTATGATCCAGATTCGACCAATTTAATTCAACTATCTCAAAAAACAACC 118845 || |||| ||||||||| |||||||| || |||||||||||| ||||||||||||| | Sbjct 593 ATAGTAAGTGTTTATGACCCAGATTCAACTAATTTAATTCAATTATCTCAAAAAACTAGT 652 Query 118846 ACACCTCTTCAACACGTGCCCTTTATCGTATTTTACGTGGATGGTGTTCCATTTAAAAAA 118905 ||||||||||| || || || ||||| |||||||| | |||||||||| ||||||||| Sbjct 653 ACACCTCTTCAGCATGTACCATTTATTGTATTTTATATTAATGGTGTTCCGTTTAAAAAA 712 Query 118906 TATGATGGTGGTTACAACCACCAAGATTTTCAAACTTTTGTACAAAAAGTTTACGGTGAA 118965 |||||||||||||| ||||||||||||||||||| |||| || |||| ||| | |||| Sbjct 713 TATGATGGTGGTTATAACCACCAAGATTTTCAAATTTTTATAAAAAATGTTATGGCTGAA 772 Query 118966 GCTTCAAAATTAAAAAATACCGATGAAATAAGTGAAATCCCTCCATATACAATTGGTAAA 119025 || || ||| | ||| |||| |||||||||||||| || || ||||| ||||| ||| Sbjct 773 GCATCTAAAGTTAAAGATACGTCAGAAATAAGTGAAATTCCACCTTATACTATTGGAAAA 832 Query 119026 CCAAATTCGGCTAAAGTATGTTATCTGACATACCAAAAAGCCTACTAAATT 119076 |||||||| || |||||||| || | ||||| |||||||| || |||||| Sbjct 833 CCAAATTCTGCCAAAGTATGCTACTTAACATATCAAAAAGCTTATTAAATT 883 >seq153419 Length=1985 Score = 181 bits (200), Expect = 1e-40 Identities = 147/178 (83%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 89102 AAAATTAAAACAAAGTATATTCCGGTTATTATTGACTATGGTAAAAGTCATGTTATTTAC 89161 ||||||||||| || ||||| || ||||| ||||| ||||||||||||| ||| || || Sbjct 611 AAAATTAAAACTAAATATATACCAGTTATAATTGATTATGGTAAAAGTCGTGTAATATAT 552 Query 89162 AATAATGTGCATTATGGTATAATTGAACCTTTTAATTTCAATAAAACTATTGATTTAGGA 89221 || ||||| ||||||||| ||||||||||||||| | |||||| ||||||||| | Sbjct 551 AACAATGTAAGTTATGGTATTATTGAACCTTTTAATATGAATAAATATATTGATTTGTGT 492 Query 89222 ATGTTGTTAATTTCTACTTTAAATGAACTTGTATTACGCCAAAAAGAAAATATTGATA 89279 |||||| ||||||| ||||||||||| ||| | ||| |||||||||||||| |||| Sbjct 491 ATGTTGCTAATTTCAACTTTAAATGAGCTTCTTTTAAATCAAAAAGAAAATATGGATA 434 >seq782681 Length=17127 Score = 170 bits (188), Expect = 2e-37 Identities = 144/177 (81%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 158022 AAATTATTTTGAAAGAAGCTCCACCTATTTTGAAGTTAGAAGAACACGAGAAGTTTCGTG 158081 || || |||||| | ||||||||||||| |||| ||||||| ||||||||| ||| Sbjct 1793 AAGTTGTTTTGAGGTTAACTCCACCTATTTTAGAGTTGGAAGAACGTGAGAAGTTTTGTG 1734 Query 158082 ATGACACTGGTAATTTATTTGAAGTTGAAGTAAGAGGAGTCAGAGAAGAGGACAAAATAT 158141 ||||||| |||||| | ||||||||||||||||||||||||||||||| | ||||||| Sbjct 1733 ATGACACAGGTAATATGTTTGAAGTTGAAGTAAGAGGAGTCAGAGAAGTTAATAAAATAT 1674 Query 158142 ATTTTAAAGCTATCGACATTGAAAAACTATTTGAAATGGACAATCTAATAAGGCATA 158198 ||||| || || || ||||||||| | ||||||||||| || ||||| | |||| Sbjct 1673 ATTTTCAATGTAGAGATATTGAAAAATTGTTTGAAATGGAAAACCTAATCAAACATA 1617 >seq577127 Length=16340 Score = 156 bits (172), Expect = 5e-33 Identities = 134/166 (81%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 158022 AAATTATTTTGAAAGAAGCTCCACCTATTTTGAAGTTAGAAGAACACGAGAAGTTTCGTG 158081 || || |||||| | ||||||||||||| | ||||| || ||||||||||||| Sbjct 6813 AAGTTGTTTTGAGGTTAACTCCACCTATTTTAGAATTAGAGGAGTGTGAGAAGTTTCGTG 6872 Query 158082 ATGACACTGGTAATTTATTTGAAGTTGAAGTAAGAGGAGTCAGAGAAGAGGACAAAATAT 158141 |||| |||| || ||||||||||||||||||||||||||||||| | ||||||| Sbjct 6873 ATGATGCTGGAAACACGTTTGAAGTTGAAGTAAGAGGAGTCAGAGAAGTTAATAAAATAT 6932 Query 158142 ATTTTAAAGCTATCGACATTGAAAAACTATTTGAAATGGACAATCT 158187 ||||||||||||| || ||||||||| | ||||||||||| || || Sbjct 6933 ATTTTAAAGCTATTGATATTGAAAAATTGTTTGAAATGGAAAACCT 6978 >seq408579 Length=3869 Score = 156 bits (172), Expect = 5e-33 Identities = 112/129 (87%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 157789 TTTAATTCAATTTGATCAAGCATATTTTTATGGATGTTTAAAACGTAAAAGAGAAATTTT 157848 ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct 2770 TTTGATTCAATTTGATCAAGCATATTTGTATGGTTGTTTAAAACGTAAAAGAGAAGTTTT 2711 Query 157849 AATTAAAAAGAAGATTTCACCTCAAGATTACTTTTATGCAAAGATTACTAAAAAAGGGTG 157908 |||||| ||||| ||||| || |||||||||||||||| || || |||| | ||||| Sbjct 2710 AATTAAGAAGAATATTTCTCCAGAAGATTACTTTTATGCTAAAGGTAGTAAAGAGGGGTG 2651 Query 157909 GGAAGAAAG 157917 | ||||||| Sbjct 2650 GAAAGAAAG 2642 >seq1240356 Length=279 Score = 123 bits (136), Expect = 3e-23 Identities = 77/83 (93%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 51049 ATTATCCATCTCAAAAATTCTAGCTATATCTTTAGCTTTAAAAACAACCTTATCTTCGCT 51108 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 76 ATTTTCCATCTCAAAAATTCTAGCTATATGTTTAGCTTTAAAAACAACCTTATCTTCGCT 135 Query 51109 TCTTTCTCCTCTCACTTCAACGT 51131 |||| ||||||| || |||| || Sbjct 136 TCTTCCTCCTCTAACATCAATGT 158 >seq665253 Length=1213 Score = 98.7 bits (108), Expect = 1e-15 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 60802 ATTGATGTCGATAGTGAATGGTTTCAAGAATTATGGTATCCTTTGAGTAAAAAGCGGGG 60860 |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 784 ATTGATGTAGATAGTGAATGGTTTCAAGAGTTATGGTATCCTTTGAGTAAAAAGCGGGG 726 >seq24346 Length=11479 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 172887 TTAAGGTTGCTCAGTTGAGTGGTTACATTGCAGAACAAACTGATTATAAACATGGTGAAC 172946 |||| |||||||||||| || | | || ||||| ||| ||| | |||||||||| Sbjct 1796 TTAAAGTTGCTCAGTTGGCGGGATCAGTGGCTGAACATTCTGCATATCATCATGGTGAAC 1855 Query 172947 A-AAACCTTTGTGAAACTATAATAAAATTTGCACAGGATTTTGTAGGTACAAATAACATA 173005 | || | ||| ||| || || || || |||||| ||||||| |||| |||||||| Sbjct 1856 AGTCACTTATGT-CAACAATCATCAACTTGGCACAGAATTTTGTGGGTAGCAATAACATC 1914 Query 173006 ACATTACTTGAACCAGATGGTCAGTTTGGTACTAGACTTGAAGGAGGTAAAGATTCAGCC 173065 | | || ||||| |||||||||||| ||| | ||| | || || || ||||||||| Sbjct 1915 AATCTTCTGCAACCAATTGGTCAGTTTGGCACTCGTCTTAATGGTGGAAAGGATTCAGCC 1974 >seq1052730 Length=3908 Score = 95.1 bits (104), Expect = 2e-14 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 50880 CAGACCTTGATTCAAATACAACCTTAAGTAAACCATTATAAGTTAAAAATATACATGGTT 50939 |||| ||| |||||||||||||||| |||||||||||||||||||||||| || |||||| Sbjct 2627 CAGATCTTCATTCAAATACAACCTTGAGTAAACCATTATAAGTTAAAAATGTATATGGTT 2686 Query 50940 TACTT 50944 ||||| Sbjct 2687 TACTT 2691 >seq1038094 Length=648 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 50885 CTTGATTCAAATACAACCTTAAGTAAACCATTATAAGTTAAAAATATACATGGTTT 50940 |||||||||||||||||||| ||||||||||||||||||| |||| || ||||||| Sbjct 435 CTTGATTCAAATACAACCTTGAGTAAACCATTATAAGTTAGAAATGTATATGGTTT 490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 643833143028000