Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq705761 372 4e-98 seq287215 333 3e-86 seq259166 324 2e-83 seq153419 248 1e-60 seq408579 179 5e-40 seq665253 159 4e-34 seq782681 134 2e-26 seq577127 116 5e-21 seq1076080 84.2 3e-11 seq638213 84.2 3e-11 >seq705761 Length=1511 Score = 372 bits (412), Expect = 4e-98 Identities = 303/365 (83%), Gaps = 12/365 (3%) Strand=Plus/Plus Query 144203 TAGCTTTAAAATATATTTTGTC---TTCTCTGACTCCCCTTACTTCAACTTCAAACACAT 144259 |||| |||||||||||||| || |||||||||||| || |||||||||||||| | | Sbjct 737 TAGCCTTAAAATATATTTTATCCTCTTCTCTGACTCCTCTCACTTCAACTTCAAATAAGT 796 Query 144260 TACCTGTGTCATCACAAAACTTCTCGCAATCTTCCAATTCCAAAATTGGGGGAGCTTCTC 144319 |||||| |||||||| |||||||||| ||||||||| || ||||| | |||||||| | Sbjct 797 TACCTGCGTCATCACGAAACTTCTCGTGATCTTCCAACTCTAAAATAAGTGGAGCTTCCC 856 Query 144320 TTAACACTTTT-------TCACACACACCGACAC-TAGT-ATCAATAAATTTTGTAACAT 144370 |||| | | || || || | | | | || | ||||||||||||||||| || Sbjct 857 TTAAAATTGTTGTATTATTCTTACTCTTCTTCTCGTATTTATCAATAAATTTTGTAATAT 916 Query 144371 TTGACTTTACCCACTCTGACTTTATAAGTATTTTAGCTCTACAATAACTTGCTATGCTCT 144430 ||||||| |||| ||| | |||||||| |||||||||| ||||||||||| | || | Sbjct 917 TTGACTTGGCCCAGTCTAATTTTATAAGAATTTTAGCTCAGCAATAACTTGCATTACTTT 976 Query 144431 CTTTCCACCCTTCTTTAGTTATTTTAGCATAAAAGTAATCTTCTGACGAAATATTCTTTT 144490 |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||| | Sbjct 977 CTTTCCACCCCTCTTTAGTTATCTTAGCATAAAAGTAATCTTCTGTTGAAATATTCTTCT 1036 Query 144491 TAATTAAAACTTCTCTTTTACGTTTCAAACAACCATAAAAATATGCTTGATCAAATTGAA 144550 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1037 TAATCAAAACTTCTCTTTTACGTTTTAAACAACCATAAAAATATGCTTGATCAAATTGAA 1096 Query 144551 TTAAA 144555 | ||| Sbjct 1097 TAAAA 1101 >seq287215 Length=1130 Score = 333 bits (368), Expect = 3e-86 Identities = 250/291 (86%), Gaps = 2/291 (1%) Strand=Plus/Plus Query 112432 ATGGTCAATGTTTACGATCCAGATTCAACCAATTTAATTCAATTATCCCAAAAAACAAGC 112491 || || | |||||| || ||||||||||| ||||||||||||||||| |||||||| || Sbjct 593 ATAGTAAGTGTTTATGACCCAGATTCAACTAATTTAATTCAATTATCTCAAAAAACTAGT 652 Query 112492 ACACCATTACAACATGTACCGTTTATAGTCTTTTATGTTAATGGTGTTCCATATAAACGT 112551 ||||| | || |||||||| ||||| || |||||| ||||||||||||| | |||| Sbjct 653 ACACCTCTTCAGCATGTACCATTTATTGTATTTTATATTAATGGTGTTCCGTTTAAAAAA 712 Query 112552 TATGATGGTGGTTATAACCATCAAGATTTTCAAAAATTTATTAGTAGTGTAAGTTTAGAA 112611 |||||||||||||||||||| ||||||||||||| ||||| | | ||| | ||| Sbjct 713 TATGATGGTGGTTATAACCACCAAGATTTTCAAATTTTTATAAAAAATGTTATGGCTGAA 772 Query 112612 GCATC-AAAGTTAAAAGATACTTCAGAAATAAGTGAAATACCACCTTACACTATTGGAAA 112670 ||||| |||||| |||||||| ||||||||||||||||| |||||||| ||||||||||| Sbjct 773 GCATCTAAAGTT-AAAGATACGTCAGAAATAAGTGAAATTCCACCTTATACTATTGGAAA 831 Query 112671 ACCAAATTCTGCCAAAGTATGCTACTTAACATACCAAAAAGCTTATTAAAT 112721 ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 832 ACCAAATTCTGCCAAAGTATGCTACTTAACATATCAAAAAGCTTATTAAAT 882 >seq259166 Length=12937 Score = 324 bits (358), Expect = 2e-83 Identities = 295/367 (80%), Gaps = 15/367 (4%) Strand=Plus/Plus Query 144202 ATAGCTTTAAAATATATTTTGT---CTTCTCTGACTCCCCTTACTTCAACTTCAAACACA 144258 ||||||||||| |||||||| | ||||||||||||| ||||||||||||||||||| Sbjct 11339 ATAGCTTTAAAGTATATTTTATTCTCTTCTCTGACTCCTCTTACTTCAACTTCAAACAAG 11398 Query 144259 TTACCTGTGTCATCACAAAACTTCTCGCAATCTTCCAATTCCAAAATTGGGGGAGCTTCT 144318 ||||||| ||||||||||| ||||||| |||||||| |||||||| || |||| ||| Sbjct 11399 TTACCTGCGTCATCACAAATCTTCTCGTGTTCTTCCAACTCCAAAATAGGTGGAGATTCC 11458 Query 144319 CTTAACACTTTTTCACAC-----ACACCGACACTAGT----ATCAATAAATTTTGTAACA 144369 ||||| | | || | || || | || || |||||||| ||| |||||| Sbjct 11459 CTTAAAAGTGTTGTATACTACTTACTCTTCTTCTCGTGTTTATCAATAACTTTAGTAACA 11518 Query 144370 TTTGACTTTACCCACTCTGACTTTATAAGTATTTTAGCTCTACAATAACTTGCTATGCTC 144429 || ||||| |||| |||| |||||||||||||||||||||| ||||||||| | || Sbjct 11519 TTCGACTTGGCCCAGTCTGGTTTTATAAGTATTTTAGCTCTACTATAACTTGCATTACTT 11578 Query 144430 TCTTTCCACCCTTCTTTAGTTATTTTAGCATAAAAGTAATC-TTCTGACGAAATATTCTT 144488 |||| ||| |||| ||||||| | || ||||||||||| || || | ||||||||| Sbjct 11579 TCTTCCCATCCTTTTTTAGTTGTCTTGGCATAAAAGTAGTCACACTTA-TTAATATTCTT 11637 Query 144489 TTTAATTAAAACTTCTCTTTTACGTTTCAAACAACCATAAAAATATGCTTGATCAAATTG 144548 |||||| |||||||||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct 11638 TTTAATCAAAACTTCTCTTTTACGTTTTAAACAACCATAAAAA-AAGCTTGATCAAATTG 11696 Query 144549 AATTAAA 144555 ||| ||| Sbjct 11697 AATAAAA 11703 >seq153419 Length=1985 Score = 248 bits (274), Expect = 1e-60 Identities = 163/180 (91%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 84753 ATAAAATTAAAACTAAGTTTATTCCAGTTATACTTGATTATGGTAAAAGTCGTGTAATAT 84812 |||||||||||||||| | ||| ||||||||| ||||||||||||||||||||||||||| Sbjct 613 ATAAAATTAAAACTAAATATATACCAGTTATAATTGATTATGGTAAAAGTCGTGTAATAT 554 Query 84813 ATAATAATGTAAGTTATGGTATTATTGAACCTTTTACTATGAATAAATACATTGATTTAA 84872 |||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 553 ATAACAATGTAAGTTATGGTATTATTGAACCTTTTAATATGAATAAATATATTGATTTGT 494 Query 84873 GTATGTTATTAATTTCAACACTAAATGAACTTCTTTTACACCAAAAAGAAAATGTGGATA 84932 ||||||| |||||||||| ||||||| ||||||||| | |||||||||||| |||||| Sbjct 493 GTATGTTGCTAATTTCAACTTTAAATGAGCTTCTTTTAAATCAAAAAGAAAATATGGATA 434 >seq408579 Length=3869 Score = 179 bits (198), Expect = 5e-40 Identities = 117/129 (91%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 144427 CTCTCTTTCCACCCTTCTTTAGTTATTTTAGCATAAAAGTAATCTTCTGACGAAATATTC 144486 || ||||||||||| |||||| | ||||||||||||||||||||||| ||||||||| Sbjct 2642 CTTTCTTTCCACCCCTCTTTACTACCTTTAGCATAAAAGTAATCTTCTGGAGAAATATTC 2701 Query 144487 TTTTTAATTAAAACTTCTCTTTTACGTTTCAAACAACCATAAAAATATGCTTGATCAAAT 144546 || |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 2702 TTCTTAATTAAAACTTCTCTTTTACGTTTTAAACAACCATACAAATATGCTTGATCAAAT 2761 Query 144547 TGAATTAAA 144555 ||||| ||| Sbjct 2762 TGAATCAAA 2770 >seq665253 Length=1213 Score = 159 bits (176), Expect = 4e-34 Identities = 103/113 (91%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 7869 ATTTTTACTTTTATCCATTCCAAAAATATTGGAATTGACGTAGATAGTGAATGGTTTCAA 7928 |||||| | |||| | |||||||||||||||||||| ||||||||||||||||||||| Sbjct 817 ATTTTTGTATATATCAACTCCAAAAATATTGGAATTGATGTAGATAGTGAATGGTTTCAA 758 Query 7929 GAATTATGGTATCCTTTGAGTAAAAAGCGGGGTGTCCTCTTGCGCACCCCACT 7981 || ||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 757 GAGTTATGGTATCCTTTGAGTAAAAAGCGGGGTGTCCTTTTGCGCACCCCGCT 705 >seq782681 Length=17127 Score = 134 bits (148), Expect = 2e-26 Identities = 96/110 (87%), Gaps = 3/110 (3%) Strand=Plus/Plus Query 144207 TTTAAAATATATTTTGT---CTTCTCTGACTCCCCTTACTTCAACTTCAAACACATTACC 144263 || |||||||||||| | ||||||||||||| ||||||||||||||||||| |||||| Sbjct 1666 TTGAAAATATATTTTATTAACTTCTCTGACTCCTCTTACTTCAACTTCAAACATATTACC 1725 Query 144264 TGTGTCATCACAAAACTTCTCGCAATCTTCCAATTCCAAAATTGGGGGAG 144313 ||||||||||||||||||||| | |||||||| || ||||| || |||| Sbjct 1726 TGTGTCATCACAAAACTTCTCACGTTCTTCCAACTCTAAAATAGGTGGAG 1775 >seq577127 Length=16340 Score = 116 bits (128), Expect = 5e-21 Identities = 95/115 (83%), Gaps = 3/115 (3%) Strand=Plus/Minus Query 144202 ATAGCTTTAAAATATATTTTGT---CTTCTCTGACTCCCCTTACTTCAACTTCAAACACA 144258 |||||||||||||||||||| | ||||||||||||| |||||||||||||||||| Sbjct 6945 ATAGCTTTAAAATATATTTTATTAACTTCTCTGACTCCTCTTACTTCAACTTCAAACGTG 6886 Query 144259 TTACCTGTGTCATCACAAAACTTCTCGCAATCTTCCAATTCCAAAATTGGGGGAG 144313 || || | ||||||| ||||||||| || || || ||||| ||||| || |||| Sbjct 6885 TTTCCAGCATCATCACGAAACTTCTCACACTCCTCTAATTCTAAAATAGGTGGAG 6831 >seq1076080 Length=6883 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 143730 TGGATTAAAACGAAGAAAGGTGCATTTTAACttttttttAATATATTCTTCTCTGTTATA 143789 |||||| || |||| |||||||||||||| ||||||| ||| | | || ||| ||| Sbjct 1612 TGGATTGAATCGAACGAAGGTGCATTTTAATTTTTTTTCTATAAACTTTTGTCTTTTAAT 1671 Query 143790 TTCATAATCAAAACTTCTATCTTTATGGTCAAATTCATCACATTCTATAGCAAGTTTATA 143849 ||| | | ||| || ||| ||| || |||||||||||| ||||| | | | || Sbjct 1672 TTCTTTCCTTCGATTTCGATTTTTGTGGCCATTTTCATCACATTCAATAGCCATTCTGTA 1731 Query 143850 TTCAGGAAAATATAAGTCAAT 143870 || | ||| ||||||||||| Sbjct 1732 ATCTGTAAAGTATAAGTCAAT 1752 >seq638213 Length=9291 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 143577 TCTTTGGGTGTAACCATTAATTTCTCTATTTAATTCTGCTATTCTGGCATCTTTTTCTTG 143636 ||||||||||||||||| |||| ||| ||||| | ||||| | ||||||| ||||| Sbjct 8054 TCTTTGGGTGTAACCATCAATTGTTCTGTTTAACGCCGCTATACAAACATCTTTCTCTTG 8113 Query 143637 TAATAACATTTTTTGATAT 143655 || |||||||||||||||| Sbjct 8114 TAGTAACATTTTTTGATAT 8132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617551608453120