Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq302911 118 1e-21 seq302910 113 4e-20 seq741633 104 2e-17 seq1341392 100 3e-16 >seq302911 Length=9965 Score = 118 bits (130), Expect = 1e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 137222 CTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGA 137281 ||||||||||||||||||| || |||| ||||| || ||||| |||||| | | Sbjct 1226 CTTTTTGTATGTTGTAATCTGACAAAGTGCGACCATCTTCCAGCTGTTTGCCAGCAAATA 1285 Query 137282 TCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTT 137341 ||||||| |||||||| || || || ||||||||||| ||| ||| ||| | | || Sbjct 1286 TCAGACGCTGCTGATCAGGTGGAATACCTTCTTTGTCTTGAATCTTTGCTTTAACATTTT 1345 Query 137342 CCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGA 137401 | | || |||| ||||| ||||| | || | ||||| || || ||||| || |||| Sbjct 1346 CAATTGTATCTGAAGGTTCAACTTCCAATGTTATTGTCTTCCCCGTTAATGTCTTCACGA 1405 Query 137402 ATATTTGCAT 137411 | || ||||| Sbjct 1406 AGATCTGCAT 1415 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 137222 CTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAG 137280 |||| ||||| |||||||| || || | || | ||||| | ||||| || ||| | Sbjct 824 CTTTCTGTATATTGTAATCTGACAGAGTCCGTCCA-TCTTCCAACTGTTTCCCTGCAAAA 882 Query 137281 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 137340 || || | ||||| || || || ||||||||||| || ||| ||| ||| | | | Sbjct 883 ATTAGCCTCTGCTGGTCTGGTGGAATGCCTTCTTTATCCTGAATCTTTGCTTTGACATTT 942 Query 137341 TCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 137400 || | ||||||| || || ||||| | || | || ||||| ||||| ||||| || Sbjct 943 TCTATTGTGTCTGACGGCTCAACTTCTAATGTTATTGTTTTGCCAGTCAACGTTTTCACA 1002 Query 137401 AATATTTGCAT 137411 ||||||||||| Sbjct 1003 AATATTTGCAT 1013 >seq302910 Length=12142 Score = 113 bits (124), Expect = 4e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 137222 CTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGA 137281 ||||||||||||||||||| | || || || || ||||||||||||||| ||| Sbjct 11150 CTTTTTGTATGTTGTAATCTGAGAGAGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAGA 11209 Query 137282 TCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTT 137341 | | || || ||||| || ||||| ||||||||||| ||||||| ||||| | || Sbjct 11210 TTAATCGCTGTTGATCTGGCGGTATTCCTTCTTTGTCTTGAATTTTTGCTTTTACATTTT 11269 Query 137342 CCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGA 137401 | | ||||||| || || ||||| | || | || || || |||| |||||||| | Sbjct 11270 CAATTGTGTCTGATGGCTCAACTTCCAATGTTATTGTTTTCCCTGTCAGAGTTTTTACAA 11329 Query 137402 ATATTTGCAT 137411 | || ||||| Sbjct 11330 AAATCTGCAT 11339 >seq741633 Length=11487 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 |||||||| || | ||| || | ||| | || ||||| || || || |||||||| | Sbjct 8866 CCTCCTCGCAACCTCAACACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCAGAC 8807 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| ||||| || || ||||||||| | || ||||||||||| || || || Sbjct 8806 AGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATGAGACGTTGCTGGTCTGGTGGA 8747 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| || ||| || | | ||| | ||||||| | ||| ||| Sbjct 8746 ATTCCTTCTTTGTCCTGGATCTTTGCCTTCACATTTTCAATTGTGTCTGAAGCTTCCACT 8687 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | |||||||| || | || ||||| || || ||||| Sbjct 8686 TCCAGTGTGATGGTCTTGCCTGTGAGGGTCTTTACAAAAATCTGCAT 8640 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACC 137273 |||||||| || || ||||||||||| || || | || | ||||| ||||| ||||| Sbjct 9748 GTAGATTCCTTCTGAATGTTGTAATCCGACAGGGTTCGTCCA-TCTTCCAGTTGCTTACC 9690 Query 137274 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 137333 |||| |||| ||||| ||||| || ||||| |||||||| ||||| || ||| || Sbjct 9689 AGCAAAGATGAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTTGCCTT 9630 Query 137334 TAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 137393 | | ||| | ||||||| | |||||| || | || | |||||||| || | || Sbjct 9629 CACATTTTCAATAGTGTCTGAAGCTTCTACCTCCAGGGTAATTGTCTTGCCAGTAAGGGT 9570 Query 137394 TTTTACGAATATTTGCATA 137412 || || || || |||||| Sbjct 9569 CTTCACAAAAATCTGCATA 9551 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262 || ||||| | |||||||| || || ||||||||||| || ||| | |||||| Sbjct 8107 ACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGACAGTGTACGACCATCTTCG 8048 Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322 ||||| || || || ||||||| | || || || || || || ||||| || || | Sbjct 8047 AGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGGTCTGGTGGAATACCTTCCTTATCCTGA 7988 Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382 || || ||| | | ||| | ||||||| | |||||||||| || | |||||| Sbjct 7987 ATCTTGGCTTTGACATTTTCAATGGTGTCTGATGCCTCTACTTCAAGGGTGATTGTCTTG 7928 Query 137383 CCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415 || |||| || || ||||| || |||||| || Sbjct 7927 CCAGTCAGGGTCTTCACGAAGATCTGCATACCT 7895 Score = 93.3 bits (102), Expect = 4e-14 Identities = 85/105 (81%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACC 137273 |||||||| || || ||||||||||| || |||| || | ||||| || || || || Sbjct 11116 GTAGATTCCTTCTGAATGTTGTAATCTGACAGGGTGCGTCCA-TCTTCAAGCTGCTTGCC 11058 Query 137274 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 |||| |||| |||||||||||||| ||||| || ||||||||||| Sbjct 11057 AGCAAAGATGAGACGTTGCTGATCTGGAGGAATCCCTTCTTTGTC 11013 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| || | || ||| ||||| | |||||||| ||||| ||||||||||| Sbjct 10462 CCACCTCTTAGCCTCAGAACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAATCTGAT 10403 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || ||||| | ||||| || ||| |||| || || || ||||| ||||| Sbjct 10402 AAGGTCCTTCCATCTTCCAACTGTTTTCCTGCAAAGATGAGTCGCTGTTGATCTGGAGGA 10343 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 |||||||| ||||| || ||| ||| | | || | ||||| | | ||| || Sbjct 10342 ATGCCTTCCTTGTCTTGGATCTTTGCTTTGACATTCTCAATGGTGTCAGAAGCTTCCACC 10283 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | ||| | |||||||| || | || || || || || |||||| Sbjct 10282 TCCAGAGTAATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCATA 10235 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || ||||| || | || || | ||| | || |||||||| || ||||||||||| | Sbjct 9550 CCACCTCGCAATCTCAGCACCAGATGCAAAGTGGATTCTTTCTGAATGTTGTAATCAGAC 9491 Query 137245 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | || | || | ||||| ||||| || || ||| |||| || | || || || || || Sbjct 9490 AGGGTACGTCCA-TCTTCCAGTTGCTTGCCTGCAAAGATTAGCCTCTGTTGGTCAGGTGG 9432 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 ||| ||||| || || ||||||| || | | || | || |||| | ||| || Sbjct 9431 TATTCCTTCCTTATCCTGAATTTTTGCCTTAACATTCTCAATTGTATCTGAAGCTTCAAC 9372 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | ||| | |||||||| |||||||| || || || || ||||| Sbjct 9371 ATCCAAAGTTATAGTCTTGCCCGTCAATGTCTTCACAAAGATCTGCAT 9324 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| || | | || |||||||| | || ||||| || || ||||||||||| Sbjct 10690 CCTCCACGCAGCCTCAGCACTAAATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGAT 10631 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || ||||| || || || |||||| |||| ||||| || || || ||||| Sbjct 10630 AAGGTCCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGAGGG 10571 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 ||||||||||| || ||| || ||| | | ||| | ||||| | | || ||| Sbjct 10570 ATGCCTTCTTTATCTTGAATCTTAGCTTTCACATTTTCAATTGTGTCAGATGCCTCAACT 10511 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | || ||||| || | ||| || || || |||||||| Sbjct 10510 TCCAATGTAATTGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCAT 10464 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 |||||||| || || || |||||||| | || ||| |||||||||||||| ||| Sbjct 8323 GTAGATTCCTTCTGAATATTGTAATCAGATAGAGTTCTCCCATCTTCGAGTTGTTTGCCA 8264 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| | ||||| | |||||||| || || || ||||| || || |||||| || Sbjct 8263 GCAAAAATCAGTCTCTGCTGATCAGGTGGGATCCCTTCCTTATCCTGAATTTTCGCCTTC 8204 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | || || | | |||||||| | || | || || || || | ||| Sbjct 8203 ACATTCTCAATTGTATCAGATGCCTCTACTTCCAATGTGATGGTTTTACCAGTTAGTGTC 8144 Query 137395 TTTACGAATATTTGCATA 137412 || |||||||| |||||| Sbjct 8143 TTAACGAATATCTGCATA 8126 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 |||||||| | | || || ||||| | |||||||||||| || || ||||| || Sbjct 9323 GCCTCCTCTGAGCCTCAGCACCAAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTGA 9264 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | |||| || || |||||||| |||||| | |||| | ||||| || || || Sbjct 9263 AAGAGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTGG 9204 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 |||||||| || || ||||||| ||||| | || | ||||| | | ||| || Sbjct 9203 GATGCCTTCCTTATCTTGAATTTTTGCTTTTACATTCTCAATAGTGTCAGATGCTTCAAC 9144 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | || || || || | |||||||| || || ||||| Sbjct 9143 CTCTAATGTTATGGTTTTCCCTGTAAGAGTTTTTACAAAAATCTGCAT 9096 Score = 82.4 bits (90), Expect = 7e-11 Identities = 141/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACC 137273 || ||||| || || ||||||||||| || || | || | ||||| || || || || Sbjct 10888 GTGGATTCCTTCTGAATGTTGTAATCTGACAGGGTTCGTCCA-TCTTCCAGCTGCTTGCC 10830 Query 137274 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 137333 ||| |||| ||||||||||| || || || || ||||||||||| || ||| || Sbjct 10829 AGCGAAGATGAGACGTTGCTGGTCTGGTGGAATACCTTCTTTGTCTTGTATCTTTGCCTT 10770 Query 137334 TAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 137393 | | || | ||||||| | || ||||| | || | |||||||| || | ||| Sbjct 10769 CACATTCTCAATGGTGTCTGAAGCCTCCACTTCCAATGTAATTGTCTTGCCTGTAAGTGT 10710 Query 137394 TTTTACGAATATTTGCATAGCT 137415 || || || || |||||| || Sbjct 10709 CTTCACAAAAATCTGCATACCT 10688 >seq1341392 Length=603 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262 || ||||| | |||||||| || || ||||||||||| || ||| | |||||| Sbjct 489 ACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGACAGTGTACGACCATCTTCG 430 Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322 ||||| || || || ||||||| | || ||||| || || |||||||| || || | Sbjct 429 AGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCTGGTGGAATGCCTTCCTTATCCTGA 370 Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382 || || || | | ||| | ||||||| || ||| ||||| | || | |||||| Sbjct 369 ATCTTCGCCTTGACATTTTCTATAGTGTCTGAGGCTTCAACTTCCAATGTTATGGTCTTG 310 Query 137383 CCGGTCAATGTTTTTACGAATATTTGCATA 137412 || || | || ||||| ||||| |||||| Sbjct 309 CCTGTGAGGGTCTTTACAAATATCTGCATA 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 480009795854400