Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq287215 113 5e-20 >seq287215 Length=1130 Score = 113 bits (124), Expect = 5e-20 Identities = 170/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 99827 TAATATGCTTTTTGATAAGTTAAGTAGCATACTTTGGCGCTGTTTGGTTTTCCGATGGTA 99886 ||||| ||||||||||| |||||||||||||||||||| ||||||||||| || ||| Sbjct 879 TAATAAGCTTTTTGATATGTTAAGTAGCATACTTTGGCAGAATTTGGTTTTCCAATAGTA 820 Query 99887 TAAGGTGGGATGTGGCTAATTTCGTTAGTGTTTTTGATTTTGGCAGCTTCTAGTGTGACG 99946 |||||||| || | || ||||| || | ||| | ||| | ||||| | || Sbjct 819 TAAGGTGGAATTTCACTTATTTCTGACGTATCTTTAACTTTAGATGCTTCAGCCATAACA 760 Query 99947 TCTTTGATAAATTTTTGCACGTCTGCAAAAGTATAGTTGCCGTCAAATTTTTTGAATGGT 100006 | ||| ||||| |||| | ||| |||| || ||| ||||||| || || Sbjct 759 TTTTTTATAAAAATTTGAAAATCTTGGTGGTTATAACCACCATCATATTTTTTAAACGGA 700 Query 100007 ACCCCGTCAATATAAAAAATTATAAATGGCACGTGTTGCAATGGCGTTGACGATTTTTGA 100066 || || | ||||||||| | |||||||| || || || | || || | ||||||| Sbjct 699 ACACCATTAATATAAAATACAATAAATGGTACATGCTGAAGAGGTGTACTAGTTTTTTGA 640 Query 100067 GA 100068 || Sbjct 639 GA 638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512434902454560