Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_024365.1 Length=51090 Score E Sequences producing significant alignments: (Bits) Value seq1378566 102 3e-17 seq1166291 86.0 2e-12 >seq1378566 Length=964 Score = 102 bits (112), Expect = 3e-17 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 39897 TCCACAACGAAGACCATGCCCATTTGATCGATGCTGACATCTGCATCATGTGGGCCTCAT 39956 || ||||||||||||| ||| || |||| || |||||| || || | |||||| Sbjct 169 TCTACAACGAAGACCACATCCACCTGCTCGACGCAGACATCGGCTTCCTCTGGGCCAGGA 110 Query 39957 CTGCCTTCACGAAGCAAGGTCGCACAGTGCTGGGCCAAGCCGAACAGGTTGCGTTCCGTG 40016 | | ||| | ||| | ||| ||||||||||| ||||| ||||| | |||||| | Sbjct 109 CGGGCTTTATCAAGGGCAGACGCCTGGTGCTGGGCCAGGCCGAGCAGGTCGTGTTCCGGG 50 Query 40017 CCGGTGGTTGGCAGAAGGCCCGGATGGAGCAGCAGATGCGTGACTGGTT 40065 ||||||| ||||||||||| || ||| ||||||||| || ||||| Sbjct 49 CCGGTGGCTGGCAGAAGGCGAGGGCGGAACAGCAGATGGTGGAGTGGTT 1 >seq1166291 Length=204 Score = 86.0 bits (94), Expect = 2e-12 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 15655 CTTGCATGGGGTGCTAGGGGTCGAGTGTTCGAATCACTCCGTCCCGACCA 15704 |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 134 CTTGCATGGGGTGCAAGGGGTCGAGTGTTCGAATCACTCCGTCCCGACCA 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160655299059808