Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq781304 96.9 6e-15
seq741633 86.0 1e-11
>seq781304
Length=12594
Score = 96.9 bits (106), Expect = 6e-15
Identities = 280/425 (66%), Gaps = 7/425 (2%)
Strand=Plus/Plus
Query 182864 GAGAACTATCGGATAATTTTTGTTACTATAATAAACATTACGATAGTGTTCAGTCTACTC 182923
|||| || || |||||||||||| || ||| || | || || | |||| || |
Sbjct 7750 GAGAGCTGTCAGATAATTTTTGTGTTTACAATGAAAAATATGACATTGTTGAGAGACCAA 7809
Query 182924 ACGCATGGGC-TAGAAGAACATTAGAAGATCACGTTAATGATCCTAGAAA--GTATATCT 182980
| || ||||| | |||| ||| | | |||||| || || | ||| | || ||||
Sbjct 7810 ATGCTTGGGCATTGAAG-ACACTTAATGATCACAGAAA--ATACAAGAGATCATACATCT 7866
Query 182981 ATTCTATTAAACAA-CTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAA 183039
| || | || || | | |||| | ||||| |||| | |||||||| | | |||
Sbjct 7867 ACACTCGTGAAGAATTTGGGAAAGTCTTTAACACTTGACGATTTATGGAATTCTGCCCAA 7926
Query 183040 ATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAG 183099
|| ||| | ||| ||| || ||||| ||| | || | | ||||| ||| | || | |
Sbjct 7927 ATTCAGTTAGTGAAAGATGGCAAAATACATGGATTCATGCATATGTATTGGACAAAGATG 7986
Query 183100 ATACTTGAATGGACAAGAACTCCGGAAGATGCTTTGAGTTATAGTATCTATATGAACAAT 183159
||| | |||||| | | | | || ||||| | ||| ||| | || ||| | || ||
Sbjct 7987 ATATTAGAATGGTCTACATCACCAGAAGAAGGTTTAAGTACTGCAATTTATTTTAATGAT 8046
Query 183160 AAGTACGAACTAGACGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGC 183219
| || | | || | | | |||||| |||| || | ||| |||||| | | ||
Sbjct 8047 AGATATTCATTGGAAGAAGCAGGTCCTAATGGATTTGTTGTATGTTTGTGGTTTGTATGT 8106
Query 183220 GGATTACACGATAGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAAT 183279
||| ||||| | || ||| |||||||| |||||||||| ||| | || ||| ||
Sbjct 8107 GGAAAACACGTTCAAGGATGGCTGGAAAGACCAGTATTTGGAAAAATACGGTACATGTAT 8166
Query 183280 TATGA 183284
|||||
Sbjct 8167 TATGA 8171
>seq741633
Length=11487
Score = 86.0 bits (94), Expect = 1e-11
Identities = 104/144 (72%), Gaps = 11/144 (8%)
Strand=Plus/Minus
Query 81637 CAAACACAGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA 81696
|||| ||||||| ||||||| || || || ||||| |||| || || | ||||| ||
Sbjct 10442 CAAATGCAGAGTAGATTCCTTTTGGATGTTGTAATCTGATAAGGTCCTTCCATCTTCCAA 10383
Query 81697 C-----------AAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAAT 81745
| |||||| |||| |||||| ||||| | || ||||||| ||||| ||
Sbjct 10382 CTGTTTTCCTGCAAAGATGAGTCGCTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGGAT 10323
Query 81746 CTTTGCTTTTATATTTTCAATCGT 81769
||||||||| | ||| ||||| ||
Sbjct 10322 CTTTGCTTTGACATTCTCAATGGT 10299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 887629825941120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |