Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq741633 111 1e-19
seq1341392 91.5 1e-13
seq599987 82.4 7e-11
>seq741633
Length=11487
Score = 111 bits (122), Expect = 1e-19
Identities = 155/212 (73%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||||| || || |||||||| |||||||| || | ||| | | | ||||| ||
Sbjct 9301 AAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTGAAAGAGTGCGGCCA-TCCTCAAG 9243
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|| ||||| || |||| | | ||||||||| || |||||||||||||| || |||
Sbjct 9242 TTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTGGGATGCCTTCCTTATCT-TGAA 9184
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||||||| | | ||||| ||||| | | || || || | || | |||||| |
Sbjct 9183 TTTTTGCTTTTACATTCTCAATAGTGTCAGATGCTTCAACCTCTAATGTTATGGTTTTCC 9124
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664
| || ||||||||||| |||||||||||| ||
Sbjct 9123 CTGTAAGAGTTTTTACAAAAATCTGCATGCCT 9092
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || || ||||| ||||||||||| || ||| | | | || || |||||||| ||
Sbjct 8836 GTCGATTCCTTCTGAATATTGTAATCAGACAGAGTGCGGCCA-TCTTCCAGCTGCTTACC 8778
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| ||||||| || |||||||| || || || ||||| ||||| ||||||| |||
Sbjct 8777 AGCAAAAATGAGACGTTGCTGGTCTGGTGGAATTCCTTCTTTGTCCTGGATCTTTGCCTT 8718
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | |||| ||||| | | ||||| || | |||| ||| ||||| || || ||
Sbjct 8717 CACATTTTCAATTGTGTCTGAAGCTTCCACTTCCAGTGTGATGGTCTTGCCTGTGAGGGT 8658
Query 133643 TTTTACGAAAATCTGCAT 133660
||||| |||||||||||
Sbjct 8657 CTTTACAAAAATCTGCAT 8640
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||||||||| || |||||||| || ||| | | | || || ||||| || ||
Sbjct 9064 GTAGACTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCA-TCTTCAAGCTGTTTTCC 9006
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| |||| | | ||| ||||| || || || ||||||||||| ||||||| |||
Sbjct 9005 TGCAAAAATCAATCTCTGTTGGTCTGGTGGTATACCTTCCTTGTCCTGGATCTTTGCCTT 8946
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | ||| | ||||| | | |||||| |||| || | |||||||| ||||||||
Sbjct 8945 CACGTTCTCTATGGTGTCTGATGCCTCCACTTCGAGTGTTATAGTTTTGCCAGTCAGAGT 8886
Query 133643 TTTTACGAAAATCTGCAT 133660
||||| || ||||||||
Sbjct 8885 CTTTACAAAGATCTGCAT 8868
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || || ||||| || |||||||| || ||| | | | || || |||||||||||
Sbjct 11116 GTAGATTCCTTCTGAATGTTGTAATCTGACAGGGTGCGTCCA-TCTTCAAGCTGCTTGCC 11058
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | ||||| || ||||| || ||||| || ||||| ||||| |||||| |||
Sbjct 11057 AGCAAAGATGAGACGTTGCTGATCTGGAGGAATCCCTTCTTTGTCCTGGATCTTCGCCTT 10998
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | ||||| ||||| | | |||||| || | ||| | |||||| || || || ||
Sbjct 10997 CACATTCTCAATGGTGTCCGACGCCTCCACTTCCAAGGTAATGGTTTTTCCAGTAAGGGT 10938
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 10937 CTTCACGAAGATCTGCAT 10920
Score = 98.7 bits (108), Expect = 9e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
||||| || ||||| || |||||||| || || | | | || || |||||||||||
Sbjct 10888 GTGGATTCCTTCTGAATGTTGTAATCTGACAGGGTTCGTCCA-TCTTCCAGCTGCTTGCC 10830
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | ||||| || |||||||| || || || ||||| ||||| |||||| |||
Sbjct 10829 AGCGAAGATGAGACGTTGCTGGTCTGGTGGAATACCTTCTTTGTCTTGTATCTTTGCCTT 10770
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | ||||| ||||| | | |||||| || | || | || ||||| || || ||
Sbjct 10769 CACATTCTCAATGGTGTCTGAAGCCTCCACTTCCAATGTAATTGTCTTGCCTGTAAGTGT 10710
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || |||||||||||
Sbjct 10709 CTTCACAAAAATCTGCAT 10692
Score = 96.9 bits (106), Expect = 3e-15
Identities = 148/209 (71%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512
||||| | ||||| |||||||| ||||| || || | | ||| ||| || || |
Sbjct 11353 AAATGAAGAGTGGATTCTTTCTGAATATTATAGTC--CGAAAGTGTACGTCCATCTTCCA 11296
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
||| ||||| || | ||||| ||||| || || || || ||||||||||| || ||
Sbjct 11295 ACTGTTTGCCTGCAAAGATGAGTCGCTGTTGATCTGGGGGAATGCCTTCCTTATCTTGGA 11236
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
| || ||| | | ||||| ||||||| | ||||| || | || | ||| || |
Sbjct 11235 TTTTCGCCTTCACATTCTCAATTGTGTCGGAAGCTTCCACCTCCAGAGTAATGGTCTTCC 11176
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661
|||| ||||| || || ||||||||||||
Sbjct 11175 CGGTAAGAGTCTTCACAAAAATCTGCATG 11147
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || || ||||| || |||||||| || || | | | || || || ||||| ||
Sbjct 9748 GTAGATTCCTTCTGAATGTTGTAATCCGACAGGGTTCGTCCA-TCTTCCAGTTGCTTACC 9690
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | ||||| ||||||||||| ||||| |||||||||||||| ||||||| |||
Sbjct 9689 AGCAAAGATGAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTTGCCTT 9630
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | |||| ||||| | | || || || | ||| | || ||||| || || ||
Sbjct 9629 CACATTTTCAATAGTGTCTGAAGCTTCTACCTCCAGGGTAATTGTCTTGCCAGTAAGGGT 9570
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || |||||||||||
Sbjct 9569 CTTCACAAAAATCTGCAT 9552
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| || | ||| || || || | ||||| ||||| || || ||||| ||||||||||||
Sbjct 10390 TCTTCCAACTGTTTTCCTGCAAAGATGAGTCGCTGTTGATCTGGAGGAATGCCTTCCTTG 10331
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| ||||||| |||| | ||||| ||||| | | ||||| || | || |
Sbjct 10330 TCTTGGATCTTTGCTTTGACATTCTCAATGGTGTCAGAAGCTTCCACCTCCAGAGTAATT 10271
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || ||||| || || |||||||||||
Sbjct 10270 GTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 10236
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||||||||| |||||||| || | || | | | || || |||||||||||
Sbjct 9976 GTGGACTCTTTCTGAATATTGTAGTCAGATAGGGTCCGTCCA-TCTTCAAGCTGCTTGCC 9918
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | ||||| || |||||||| ||||| || ||||| || || |||||| ||
Sbjct 9917 AGCAAAGATGAGACGTTGCTGGTCTGGAGGAATACCTTCTTTATCCTGGATCTTCGCTTT 9858
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||| | | ||||| || | ||| | |||||| || || || ||
Sbjct 9857 CACATTTTCGATGGTGTCTGAAGCTTCCACTTCCAGGGTAATGGTTTTTCCAGTAAGTGT 9798
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 9797 CTTCACAAAGATCTGCAT 9780
Score = 82.4 bits (90), Expect = 7e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||| || || ||||| ||||||||||| | || | || ||||| || |||||
Sbjct 8324 GGTAGATTCCTTCTGAATATTGTAATCAGATAGAGTTCTCCCATCTTCGAGTTGTTTGCC 8265
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CT 133581
|| |||| || | |||||| || || ||||| |||||||| || ||| ||| | ||
Sbjct 8264 AGCAAAAATCAGTCTCTGCTGATCAGGTGGGATCCCTTCCTTATC-CTGAATTTTCGCCT 8206
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| || || | | ||| || || | |||| |||||| || || || |
Sbjct 8205 TCACATTCTCAATTGTATCAGATGCCTCTACTTCCAATGTGATGGTTTTACCAGTTAGTG 8146
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 8145 TCTTAACGAATATCTGCAT 8127
>seq1341392
Length=603
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512
||||| | ||| || || ||||| || |||||||| || ||| |||| || ||||
Sbjct 486 AAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGACA--GTGTACGACCATCTTCGA 429
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
| ||||| || ||| | || |||| ||| || || || || ||||||||||| || |
Sbjct 428 GTTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCTGGTGGAATGCCTTCCTTATCCTGAA 369
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | || | ||||| | || || || || | || | ||| ||||
Sbjct 368 TCTTCGCCTTGACATTTTCTATAGTGTCTGAGGCTTCAACTTCCAATGTTATGGTCTTGC 309
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || || || ||||| || ||||||||
Sbjct 308 CTGTGAGGGTCTTTACAAATATCTGCAT 281
>seq599987
Length=38784
Score = 82.4 bits (90), Expect = 7e-11
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923
||||||| | ||||||| || || |||||| |||| || || | |||| ||||
Sbjct 16960 TGTACTCGATAATCTCGGTACATAGGTTGCTGGATTTTATTGTACCTAGATTCTGCTGAT 17019
Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTG 148981
|| ||| | ||||| || ||||||||||||||||| ||| |||||||||||| ||
Sbjct 17020 TGGACTTTCGATTGCATGCATCCTTGTACAGCATGTAAGGTGTGCCAGTTTCCACTTG 17077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 474976091242080
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