Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq599987 84.2 5e-11 >seq599987 Length=38784 Score = 84.2 bits (92), Expect = 5e-11 Identities = 134/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 110743 AGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCT 110802 ||||| ||| ||||||| ||||| || || || |||||| ||||| | ||||||||| Sbjct 25647 AGAGACCTGGAGCATTTGCCATCTACCTGGAGCCATGGCATGCAGATGTCTTTGAATTCC 25588 Query 110803 TAGAACTTCGTAAAA-ATCAAGGATTT-GAAGAACAAAGAGCACGTGATTTATTTTATGC 110860 | || || | |||| | || || || ||| | || |||||||| |||||||| Sbjct 25587 TGGACCT--GAAAAAGAACACGGGGAAAGAGGAAGTCCGTGCTCGTGATTTGTTTTATGC 25530 Query 110861 AATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTAT 110920 | |||||| |||||||||||||| ||||| | | |||| |||| | | || Sbjct 25529 TTTATGGATTCCAGATTTATTCATGCGGCGTGTAGAGGCCAATGAAGAGTGGAGTTTAAT 25470 Query 110921 GTGTCCTCA 110929 |||||| || Sbjct 25469 GTGTCCCCA 25461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1165562482145812