Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq741633 113 4e-20
seq1341392 96.9 3e-15
seq302910 91.5 1e-13
>seq741633
Length=11487
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || || ||| |||| || ||| | ||||| | ||||| || ||
Sbjct 8127 ATGCAGATATTCGTTAAGACACTAACTGGTAAAACCATCACATTGGAAGTAGAGGCATCT 8186
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| || ||| | || || |||||| ||||| || || || || || ||||||
Sbjct 8187 GATACAATTGAGAATGTGAAGGCGAAAATTCAGGATAAGGAAGGGATCCCACCTGATCAG 8246
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| ||||| |||| | ||||||||||||||||||| |||| | | |||||||||
Sbjct 8247 CAGAGACTGATTTTTGCTGGCAAACAACTCGAAGATGGGAGAACTCTATCTGATTACAAT 8306
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||||| || ||||| ||| | || | || || || ||| | || ||
Sbjct 8307 ATTCAGAAGGAATCTACCCTGCACCTGGTATTGAGGTTGCGTGGTGG 8353
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233
|||||| | ||||||||||| | || || ||| | || || | || || |||||
Sbjct 9095 CATGCAGATTTTTGTAAAAACTCTTACAGGGAAAACCATAACATTAGAGGTTGAAGCATC 9154
Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| ||||| ||| | |||||| ||||||| ||||| || || || || || || ||
Sbjct 9155 TGACACTATTGAGAATGTAAAAGCAAAAATTCAAGATAAGGAAGGCATCCCACCTGACCA 9214
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
||| ||| | |||| | ||||||||||| || |||| | | | | || |||||
Sbjct 9215 GCAGAGATTGATTTTTGCTGGCAAACAACTTGAGGATGGCCGCACTCTTTCAGACTACAA 9274
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||| || |||||||| || | ||||| ||| | || | ||||||||
Sbjct 9275 TATCCAGAAAGAATCTACACTACATTTGGTGCTGAGGCTCAGAGGAGG 9322
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233
|||||| | ||||| || ||||| || || || | || || | || || |||||
Sbjct 9323 CATGCAGATCTTTGTGAAGACATTGACGGGCAAGACTATAACTTTGGATGTTGAAGCTTC 9382
Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
||||| || ||| | || || ||||||| ||||| || || ||||| || || ||
Sbjct 9383 AGATACAATTGAGAATGTTAAGGCAAAAATTCAGGATAAGGAAGGAATACCACCTGACCA 9442
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTAC 25351
|| || || || | | ||||| ||||| ||||||| | | |||| | |||||
Sbjct 9443 ACAGAGGCTAATCTTTGCAGGCAAGCAACTGGAAGATGGACGTACCCTGTCTG--ATTAC 9500
Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| ||||| ||||||||||| | ||| | ||| | |||||| |||| ||
Sbjct 9501 AACATTCAGAAAGAATCCACTTTGCATCTGGTGCTGAGATTGCGAGGTGG 9550
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| || ||| | || |||||| | || || | ||||| |||||
Sbjct 9780 ATGCAGATCTTTGTGAAGACACTTACTGGAAAAACCATTACCCTGGAAGTGGAAGCTTCA 9839
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || ||| || || |||||||| ||||| || || || |||
Sbjct 9840 GACACCATCGAAAATGTGAAAGCGAAGATCCAGGATAAAGAAGGTATTCCTCCAGACCAG 9899
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
||| | ||||| | | ||||| || || ||||||| | | | || ||||||
Sbjct 9900 CAACGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGACGGACCCTATCTGACTACAAT 9959
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||||| ||||| ||||| | ||| | ||| |||| ||| |||| ||
Sbjct 9960 ATTCAGAAAGAGTCCACTTTGCATCTGGTGCTAAGGTTGCGAGGTGG 10006
Score = 87.8 bits (96), Expect = 2e-12
Identities = 161/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233
|||||| | ||||| || || | ||||| || | || || | || || |||||
Sbjct 11147 CATGCAGATTTTTGTGAAGACTCTTACCGGGAAGACCATTACTCTGGAGGTGGAAGCTTC 11206
Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
||| || || ||| | || || ||||| ||||| || || || || || |||||
Sbjct 11207 CGACACAATTGAGAATGTGAAGGCGAAAATCCAAGATAAGGAAGGCATTCCCCCAGATCA 11266
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
|| ||||||| | | |||||||| | ||||||| | | | || || ||
Sbjct 11267 ACAGCGACTCATCTTTGCAGGCAAACAGTTGGAAGATGGACGTACACTTTCGGACTATAA 11326
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGAT 25409
|||||| ||||||||||| ||||||| ||| || | |||||||| ||| | ||||
Sbjct 11327 TATTCAGAAAGAATCCACTCTTCATTTGGTGCTACGTTTGAGAGGTGGATATTGAT 11382
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || || || | || || || | ||||| | ||||| || ||
Sbjct 7899 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACAATCACCCTTGAAGTAGAGGCATCA 7958
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || || || | || ||| || ||| ||||| || ||||| || || || ||
Sbjct 7959 GACACCATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGTATTCCACCAGACCAA 8018
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352
|| || || || | || || || ||||||||||||| | | | |||| |||||||
Sbjct 8019 CAGAGGCTGATCTTCGCAGGGAAGCAACTCGAAGATGGTCGTACACTGTC--TGATTACA 8076
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| ||||| || ||||| ||| | ||||| || ||||||||||||| ||
Sbjct 8077 ACATTCAGAAGGAATCTACCCTCCATTTGGTACTAAGATTGAGAGGTGG 8125
>seq1341392
Length=603
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | |||||||| || | || || || | || || | ||||| ||||||
Sbjct 281 ATGCAGATATTTGTAAAGACCCTCACAGGCAAGACCATAACATTGGAAGTTGAAGCCTCA 340
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || || || ||| ||||| || || || || || |||||
Sbjct 341 GACACTATAGAAAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCACCAGATCAA 400
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352
|| || || || | || || || ||||||||||||| | | | |||| |||||||
Sbjct 401 CAGAGGCTGATCTTCGCAGGGAAGCAACTCGAAGATGGTCGTACACTGTC--TGATTACA 458
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| ||||| || ||||| ||| | ||||| || ||||||||||||| ||
Sbjct 459 ACATTCAGAAGGAATCTACCCTCCATTTGGTACTAAGATTGAGAGGTGG 507
>seq302910
Length=12142
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233
||||||| | ||||| || |||||||| || ||| | || || | ||||| ||| |||
Sbjct 4193 CATGCAAATTTTTGTCAAGACATTAACAGGTAAAACAATAACACTGGAAGTTGAA-CCAT 4135
Query 25234 C-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATC 25292
| |||||||| || | || || ||||| || ||||| || || || || || |
Sbjct 4134 CAGATACTATTGAAAATGTGAAGGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGACC 4075
Query 25293 AGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACA 25352
|||| || || |||| | || |||||| | ||||||| | | | | || ||||
Sbjct 4074 AGCAGAGGCTTATTTTTGCTGGAAAACAATTGGAAGATGGGCGTACTTTATCTGACTACA 4015
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAG 25389
||||||| ||||| ||||| | ||||| || ||||
Sbjct 4014 ATATTCAGAAAGAGTCCACATTACATTTGGTTCTAAG 3978
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233
|||||| | ||||||||||| | || || ||| | || || | ||||| | |||||
Sbjct 11340 CATGCAGATTTTTGTAAAAACTCTGACAGGGAAAACAATAACATTGGAAGTTG-AGCCAT 11282
Query 25234 C-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATC 25292
| || || || || | |||||| ||||||| || ||||| || |||||||| ||||
Sbjct 11281 CAGACACAATTGAAAATGTAAAAGCAAAAATTCAAGACAAAGAAGGAATACCGCCAGATC 11222
Query 25293 AGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACA 25352
| || || | || | | || |||||||| || |||| |||| | || |||||||
Sbjct 11221 AACAGCGATTAATCTTTGCTGGTAAACAACTTGAGGATGGAAGAACTCTCTCAGATTACA 11162
Query 25353 ATATTCAAAAAG 25364
| || |||||||
Sbjct 11161 ACATACAAAAAG 11150
Score = 89.7 bits (98), Expect = 4e-13
Identities = 136/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| ||||| | || || ||| | || || | ||||| ||| ||| |
Sbjct 4509 ATGCAAATTTTTGTGAAAACTCTCACTGGTAAAACAATAACTCTGGAAGTGGAA-CCATC 4451
Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
||||| || || | || || |||||| |||||||| || || || || |||||
Sbjct 4450 AGATACCATAGAAAATGTTAAGGCAAAAATCCAGGATAAAGAAGGGATCCCACCTGATCA 4391
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
|| || ||||| | || || |||||||| ||||||| | | | || ||||||||
Sbjct 4390 ACAGAGGCTCATCTTCGCAGGGAAACAACTAGAAGATGGTCGTACCCTCTCAGATTACAA 4331
Query 25354 TATTCAAAAAG 25364
||| |||||||
Sbjct 4330 TATCCAAAAAG 4320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 437319201709440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |