Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq741633 95.1 1e-14 seq302910 89.7 4e-13 >seq741633 Length=11487 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || ||||| ||| | ||||| || ||||| || ||||| ||| | Sbjct 8127 ATGCAGATATTCGTTAAGACACTAACTGGTAAAACCATCACATTGGAAGTAGAGGCATCT 8186 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | ||||| |||||| || || ||||| | || |||||| Sbjct 8187 GATACAATTGAGAATGTGAAGGCGAAAATTCAGGATAAGGAAGGGATCCCACCTGATCAG 8246 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || || |||| ||| ||||||||| | |||||| | |||| | |||||||| Sbjct 8247 CAGAGACTGATTTTTGCTGGCAAACAACTCGAAGATGGGAGAACTCTATCTGATTACAAT 8306 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || || |||||||| || || | ||||||||||| || || || Sbjct 8307 ATTCAGAAGGAATCTACCCTGCACCTGGTATTGAGGTTGCGTGGTGG 8353 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| |||||||| || || | ||||||||||| ||||| |||| ||| | Sbjct 10236 ATGCAGATTTTTGTGAAGACTCTTACTGGCAAGACAATTACTCTGGAGGTGGAAGCTTCT 10295 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || ||| ||| || ||||| |||||| | || |||||| Sbjct 10296 GACACCATTGAGAATGTCAAAGCAAAGATCCAAGACAAGGAAGGCATTCCTCCAGATCAA 10355 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | || || | ||| || ||||| || |||||| | || | ||||||||| Sbjct 10356 CAGCGACTCATCTTTGCAGGAAAACAGTTGGAAGATGGAAGGACCTTATCAGATTACAAC 10415 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 || ||||| |||||||| || ||||| || ||||| || |||| ||| Sbjct 10416 ATCCAAAAGGAATCTACTCTGCATTTGGTTCTGAGGCTAAGAGGTGGA 10463 >seq302910 Length=12142 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| || ||||| || || || || || || ||||| ||||| Sbjct 4192 ATGCAAATTTTTGTCAAGACATTAACAGGTAAAACAATAACACTGGAAGTTGAACCATCA 4133 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | ||||| ||||| ||||||||||| | || || || Sbjct 4132 GATACTATTGAAAATGTGAAGGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGACCAG 4073 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || |||||||||| ||| || |||||||| |||||| ||| | || ||||| Sbjct 4072 CAGAGGCTTATTTTTGCTGGAAAACAATTGGAAGATGGGCGTACTTTATCTGACTACAAT 4013 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||| || ||| ||||||| || | ||| | || || || Sbjct 4012 ATTCAGAAAGAGTCCACATTACATTTGGTTCTAAGGCTTCGTGGTGG 3966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395477148907136