Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq791531 134 2e-26
seq599987 131 2e-25
seq599989 96.9 5e-15
>seq791531
Length=8839
Score = 134 bits (148), Expect = 2e-26
Identities = 164/223 (74%), Gaps = 3/223 (1%)
Strand=Plus/Minus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
|||||||||| ||| | ||| || |||||| || || ||||||| ||| | ||| |
Sbjct 7339 CCTCATCTCTTGAAATAAGTTCATTGCTAAATGTAAGACCTGGCATTAAACCTCTCTTCT 7280
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
| ||||| || || || |||||| ||||| ||||| |||||||| || || |||||||
Sbjct 7279 TAAGCCAGAAAATAGCTGCAAAACTGCCAGAGAAGAATATGCCTTCCACAGCAGCAAATG 7220
Query 39759 CAACAAGTCTCTCTCCGTAACTTGTA---TCATTATGTATCCACTTCTGTGCCCAATCAG 39815
||| | | |||| | | | | | |||| | |||||| | ||||||| ||||
Sbjct 7219 CAATTACACGCTCTGCAAATGTGGCAGATTCATCAGCAATCCACCTGAGTGCCCAGTCAG 7160
Query 39816 CTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858
| || ||||||||||| |||| ||||| |||||||| |||||
Sbjct 7159 CCTTTTTCTTTACACATGGCAAAGTTTCAATAGCATTGAAGAG 7117
Score = 120 bits (132), Expect = 4e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 39867 TTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGT 39926
||||| || ||| |||| |||||||| || | ||||||||||| || ||||| | |
Sbjct 7017 TTTCAGCAGAATCCTTAATGTATGTATCAATGAGAAGACTATACATCTCAGAATGCACAT 6958
Query 39927 TTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAAC 39986
| || || || || || || || || ||||||||||||||||| | ||| || ||| ||
Sbjct 6957 TCTCCATAGCAATTTGGAAGCCATAGAAACATCTTGCTTCAGTTACTTGAACTTCTTGAC 6898
Query 39987 AAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATA 40046
|| ||||| ||| ||||| || || || ||||||||||| || || || || | |
Sbjct 6897 TGAACCTTTCAACCAGGTTTTCGTTAACAATGCCATCACTAGCAGCGAAGAAAGCTAGAA 6838
Query 40047 CATGTTTAATAAAATATTTTTCATCGGGT 40075
|||| ||| |||| |||| || |||
Sbjct 6837 CATGGGAAATGAAATGCCTTTCTTCAGGT 6809
Score = 105 bits (116), Expect = 9e-18
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162
|| |||| ||||||||||||||| ||||| || ||||| ||||| ||||| ||||| |
Sbjct 6576 TTCGATAAATCTACTTCTTCAGCCGTCCAGAAAGACGCTTCTGCTTTTTTATACATAGCC 6517
Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATG 40222
|| |||||| |||| || ||||| ||||| |||||||| |||| || | | || |
Sbjct 6516 CAAATATCATGATACTGAATTGGGAAAATGACAAATCTTCTTGGGTTCTCTCTCAGTAGA 6457
Query 40223 GGTTCCATAACTAAATCA 40240
||||||| ||| ||||
Sbjct 6456 GGTTCCAACTCTATATCA 6439
>seq599987
Length=38784
Score = 131 bits (144), Expect = 2e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778
|||||||| ||||| || || | || || || ||||| |||||||||||||| | ||
Sbjct 15439 TGAAATTCTCCAGACAAAACGCGGCGTGTATATATATTGCTGGTATATGGTTCAAAGGAC 15498
Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838
||||| ||||| || ||||| ||||| |||||||||||||| ||||||| ||| | |
Sbjct 15499 TCATTGTTTCCAAGTATTTGGGCAGTCGATGCAGTTGGCATTGGTGCCAACAAGAGAGAG 15558
Query 68839 TTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGAT 68898
|| | || |||||| ||||| ||||| ||| |||||||||||| ||
Sbjct 15559 TTGCGAACACCATGAACAGCAATTTTTTCTTTGAGAGCAGCCCAATCCCAAAGTGAAGTA 15618
Query 68899 GGTACAACATTCCAAAGATCGTATTGTAGAAT 68930
||| ||||| ||| | ||| || |||| |||
Sbjct 15619 GGTTTAACATCCCACATATCATACTGTAAAAT 15650
Score = 118 bits (130), Expect = 1e-21
Identities = 113/145 (78%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 68442 CCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATT 68501
|||| | || |||||||| |||||| || |||| |||| || || ||||| || ||
Sbjct 2112 CCATGCATAAAAATGCATTGATGTTAGCTTTCCATAATTTGGCTCAGCAATATGTATGTT 2171
Query 68502 CATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTT 68561
| || ||||| ||||| ||||||||||||||||| || |||||||| ||||| | ||
Sbjct 2172 GAGAGACTGACTCTGATCAATGAAAGCTCCTCTATCAGCTGCCATTTTGATAATTGTTTT 2231
Query 68562 TTGAGGAATTTCCCAAATAGTCTTA 68586
|||||||||||||| | ||| |||
Sbjct 2232 CTGAGGAATTTCCCACACAGTTTTA 2256
Score = 107 bits (118), Expect = 3e-18
Identities = 122/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 68980 TCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTA 69039
|| ||||||||||| ||||| ||||| || || || || |||||||| || |||| ||
Sbjct 16328 TCTGCTAGTTCACAGCTTGCTTCTAAAGCTCCATAGTAGATTGTTTCAAATATCTGGATA 16387
Query 69040 TTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCC 69099
|| | | |||||| ||| ||| || |||||||| | ||||||||| ||||| ||
Sbjct 16388 TTTAACTTTTGTGCCTCTTCACTCTCAAATGGATACCTCATAAGAATAAACGCATCGGCA 16447
Query 69100 AATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGA 69143
| || ||||| || ||||| ||||| | ||| | | | |||||
Sbjct 16448 AGGCCTTGAACACCGATACCAATAGGACGATGCCGCATGTTTGA 16491
>seq599989
Length=4882
Score = 96.9 bits (106), Expect = 5e-15
Identities = 108/142 (76%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049
|||||| || ||| | |||||||| || |||||||| || ||||||| | ||||||
Sbjct 4426 AGTTCCAGCTCCAAAGAGGGTAGGAGAAGCATGAGTGAAGTATCTTTCAGATAACAGATT 4485
Query 70050 GTATGTTTCAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCA 70108
||||| | ||||| | ||||| ||| ||| | || || || | || ||||||||||
Sbjct 4486 ATATGTCTGTATAGCAGCATCTATGTCCTCACCG-TGTATGCCAACAGCTACACGCATCA 4544
Query 70109 ACATATGCTGAGGTCGTTCTAC 70130
||||||| ||||| ||||| ||
Sbjct 4545 ACATATGTTGAGGCCGTTCAAC 4566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 674909430590880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |