Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_027348.1 Length=73990 Score E Sequences producing significant alignments: (Bits) Value seq1174552 120 1e-22 >seq1174552 Length=209 Score = 120 bits (132), Expect = 1e-22 Identities = 121/156 (78%), Gaps = 6/156 (4%) Strand=Plus/Minus Query 21948 CCTGAGCTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACAT 22007 |||||||||| | || |||||||| ||| ||||| ||||| ||||||||||||||||| Sbjct 161 CCTGAGCTGCCAGCTGTATCAGCGTTCCGCCGACATCTTCCTCGGCGTGCCCTTCAACAT 102 Query 22008 CGCCAGCTACGCGCTGCTGACGCACCTCATGGCGGCCACGGT---CGGCATGCAGGCCGA 22064 |||||||| |||||| |||| ||| |||| |||| ||| ||| ||||| | | Sbjct 101 TGCCAGCTATGCGCTGTTGAC---CCTGATGGTGGCCCAGGTCACCGGGCTGCAGCCGGG 45 Query 22065 GAAGTTCATCTGGTCTGGCGGTGACTGCCACCTGTA 22100 | ||||||||| | |||||||| ||||| || || Sbjct 44 CGAATTCATCTGGACCGGCGGTGATTGCCATCTCTA 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 232612708695212