Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq791531 132 4e-26 seq600855 107 1e-18 >seq791531 Length=8839 Score = 132 bits (146), Expect = 4e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877 ||||||| |||||| ||||| || || ||| | || || || ||||| || || | Sbjct 6805 TAAAACCTGAAGAAAGGCATTTCATTTCCCATGTTCTAGCTTTCTTCGCTGCTAGTGATG 6864 Query 43878 GGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCAC 43937 | || || || ||||| ||||| |||| |||||||||||| || | |||||| Sbjct 6865 GCATTGTTAACGAAAACCTGGTTGAAAGGTTCAGTCAAGAAGTTCAAGTAACTGAAGCAA 6924 Query 43938 GATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTC 43997 ||||||| ||||| || |||||||| || || ||| | ||||| || ||||| ||||||| Sbjct 6925 GATGTTTCTATGGCTTCCAAATTGCTATGGAGAATGTGCATTCTGAGATGTATAGTCTTC 6984 Query 43998 TGATAGATACGTACATCAAAGAT 44020 | || ||||| ||||| || ||| Sbjct 6985 TCATTGATACATACATTAAGGAT 7007 >seq600855 Length=4662 Score = 107 bits (118), Expect = 1e-18 Identities = 217/321 (68%), Gaps = 12/321 (4%) Strand=Plus/Plus Query 40862 TGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGA 40921 || |||||| |||||||| || ||||| ||||||| ||| || ||||||||| | || || Sbjct 2247 TGCAGGTGACCTTGGTCCAGTGTATGGTTTTCAGTGGCGCCACTTTGGAGCAGATTACGA 2306 Query 40922 CACTATGTACTCTGATTATACCAAT------AAAGGAATGGATCAATTACAGTGCGTTAT 40975 | | ||| |||| | | || ||||| | |||||| | ||| || || Sbjct 2307 ----AGGAACT--GATTCCAACTATGAGGGCAAAGGTGTTGATCAACTTCAGCATGTGAT 2360 Query 40976 AGATACGATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAAC 41035 | | || | | |||| ||| || || || || |||| |||||||||||| Sbjct 2361 ACACACACTACGCACAAATCCAGATGATCGCCGCATCATCATGTGTGCGTGGAACCCACG 2420 Query 41036 GGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAA 41095 || | | ||||| |||| ||||| |||| || || ||||| || || Sbjct 2421 AGATTTGGGCCTTATGGCTCTGCCCCCTTGCCATTGCTTGGTACAATTTTATGTAGCAAA 2480 Query 41096 TGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTT 41155 ||| || |||||||| || | || |||||||||| || |||||||| || || || || Sbjct 2481 TGGGGAGCTGTCATGCCAGCTATACCAAAGATCAGCAGATATGGGACTTGGTGTTCCATT 2540 Query 41156 TAACATAGCGAGTTATGCTCT 41176 ||| |||| || |||||||| Sbjct 2541 TAATGTAGCCAGCTATGCTCT 2561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 390686555739460