Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq791531 132 4e-26
seq600855 107 1e-18
>seq791531
Length=8839
Score = 132 bits (146), Expect = 4e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877
||||||| |||||| ||||| || || ||| | || || || ||||| || || |
Sbjct 6805 TAAAACCTGAAGAAAGGCATTTCATTTCCCATGTTCTAGCTTTCTTCGCTGCTAGTGATG 6864
Query 43878 GGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCAC 43937
| || || || ||||| ||||| |||| |||||||||||| || | ||||||
Sbjct 6865 GCATTGTTAACGAAAACCTGGTTGAAAGGTTCAGTCAAGAAGTTCAAGTAACTGAAGCAA 6924
Query 43938 GATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTC 43997
||||||| ||||| || |||||||| || || ||| | ||||| || ||||| |||||||
Sbjct 6925 GATGTTTCTATGGCTTCCAAATTGCTATGGAGAATGTGCATTCTGAGATGTATAGTCTTC 6984
Query 43998 TGATAGATACGTACATCAAAGAT 44020
| || ||||| ||||| || |||
Sbjct 6985 TCATTGATACATACATTAAGGAT 7007
>seq600855
Length=4662
Score = 107 bits (118), Expect = 1e-18
Identities = 217/321 (68%), Gaps = 12/321 (4%)
Strand=Plus/Plus
Query 40862 TGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGA 40921
|| |||||| |||||||| || ||||| ||||||| ||| || ||||||||| | || ||
Sbjct 2247 TGCAGGTGACCTTGGTCCAGTGTATGGTTTTCAGTGGCGCCACTTTGGAGCAGATTACGA 2306
Query 40922 CACTATGTACTCTGATTATACCAAT------AAAGGAATGGATCAATTACAGTGCGTTAT 40975
| | ||| |||| | | || ||||| | |||||| | ||| || ||
Sbjct 2307 ----AGGAACT--GATTCCAACTATGAGGGCAAAGGTGTTGATCAACTTCAGCATGTGAT 2360
Query 40976 AGATACGATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAAC 41035
| | || | | |||| ||| || || || || |||| ||||||||||||
Sbjct 2361 ACACACACTACGCACAAATCCAGATGATCGCCGCATCATCATGTGTGCGTGGAACCCACG 2420
Query 41036 GGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAA 41095
|| | | ||||| |||| ||||| |||| || || ||||| || ||
Sbjct 2421 AGATTTGGGCCTTATGGCTCTGCCCCCTTGCCATTGCTTGGTACAATTTTATGTAGCAAA 2480
Query 41096 TGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTT 41155
||| || |||||||| || | || |||||||||| || |||||||| || || || ||
Sbjct 2481 TGGGGAGCTGTCATGCCAGCTATACCAAAGATCAGCAGATATGGGACTTGGTGTTCCATT 2540
Query 41156 TAACATAGCGAGTTATGCTCT 41176
||| |||| || ||||||||
Sbjct 2541 TAATGTAGCCAGCTATGCTCT 2561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 390686555739460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |