Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq638214 129 7e-25 seq791531 84.2 3e-11 >seq638214 Length=1998 Score = 129 bits (142), Expect = 7e-25 Identities = 116/139 (83%), Gaps = 5/139 (4%) Strand=Plus/Plus Query 142518 AGGCGAGACA-ACCTGGTTGCGGGAAGTTCCTTAGAGCTCTAAC-TACCACCCTCATTTG 142575 |||| | ||| |||| |||||||||| ||||||||| ||||| ||||||| ||||||| Sbjct 1257 AGGCAATACACACCTTGTTGCGGGAAACCCCTTAGAGC-CTAACCTACCACCTTCATTTG 1315 Query 142576 GAAACTTTTGGGGGGATCTCGGTTAATTACCGAACCCGATGGTAA-AAAGGTTAGAGATT 142634 ||||||| ||| |||| ||||| |||| ||||||| | ||||||| || |||||| |||| Sbjct 1316 GAAACTTATGGAGGGAACTCGGGTAATGACCGAACACAATGGTAATAACGGTTAG-GATT 1374 Query 142635 GGATAATCCGCAGGCGAGA 142653 || |||||||||||| || Sbjct 1375 GGGCAATCCGCAGGCGCGA 1393 >seq791531 Length=8839 Score = 84.2 bits (92), Expect = 3e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 130035 CCTCGTCACGGGAGATGAGTTCATT-CGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||| || | || || |||||||| | | | | | ||||||||||| | ||| | |||| Sbjct 7339 CCTCATCTCTTGAAATAAGTTCATTGCTAAATGTA-AGACCTGGCATTAAACCTCTCTTC 7281 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | ||||||||| || ||| |||||||||||| || || |||||| || || Sbjct 7280 TTAAGCCAGAAAATAGCTGCAAAACTGCCAGAGAAGAATATGCCTTCCACAGCAGCAAAT 7221 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCCCACTGC 130213 |||| | |||||| ||||| | | || | | ||| |||| | | ||||| | Sbjct 7220 GCAATTACACGCTCTGCAAATGTGGCAGATTCATCAGCAATCCACCTGAGTGCCCAGTCA 7161 Query 130214 GCCTTTTTCT 130223 |||||||||| Sbjct 7160 GCCTTTTTCT 7151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607631971943520