Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq600855 87.8 1e-12 >seq600855 Length=4662 Score = 87.8 bits (96), Expect = 1e-12 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 111795 CATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCC 111854 |||| |||| | |||| || || || | |||||||| ||||| || ||||||||| | Sbjct 2574 CATGCATGTCAATAGAGCATAGCTGGCTACATTAAATGGAACACCAAGTCCCATATCTGC 2515 Query 111855 CGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTG-ACAAAGTA 111913 |||||||| |||||||| ||||| || | | || ||||||||||| || ||| | Sbjct 2514 TGATCTTTGGTATAGCTGGCATGACAGCTCCCCATTTGCTACATAAAATTGTACCAAGCA 2455 Query 111914 CATGACAAGGAGGCAATGCCAT 111935 ||| ||||| |||| ||||| Sbjct 2454 -ATGGCAAGGGGGCAGAGCCAT 2434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385270008507196