Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq1228585 147 2e-30
>seq1228585
Length=262
Score = 147 bits (162), Expect = 2e-30
Identities = 160/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 19196 TTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGC 19255
||||||||||||||||||||||| |||||| | || ||| |||||| |||||||| |||
Sbjct 16 TTCACGCACGCGACGCCGACCCTGTTCAACTCTGGAACGCCCAACCCCCAGATGTCCAGC 75
Query 19256 TGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAG 19315
|| ||| | || | || ||||| |||||||| ||||| ||||| |||||| | ||| ||
Sbjct 76 TGCTTCATCATGCCGATTAAGGACGACAGCATCGAGGGTATCTATGAGACGTTGAAGCAG 135
Query 19316 TGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGA-TCCACTGCTCGAATATCCGGTC 19374
||||||| | |||||| | |||| || || || | | | ||| |||||||||| |
Sbjct 136 TGCGCGCTGGTTTCCAAGAGTGCCGGTGGAATTGGCATTTCTGTGC-AGAATATCCGGGC 194
Query 19375 GAGTGGTACACGAATCAATGGGACGAACGG 19404
||| || | || || |||||||| ||
Sbjct 195 CAGTCGTTCGTACATTAAAGGGACGAATGG 224
Score = 138 bits (152), Expect = 1e-27
Identities = 182/247 (74%), Gaps = 4/247 (2%)
Strand=Plus/Minus
Query 79564 AAAACTCGGAGCATGGGCACGATGCCGT-CGGCGACGCCGTTCGTCCCGTTGATTCGTGT 79622
|| ||||| ||||||||| | || | || ||| || |||||||| || || |
Sbjct 260 AACACTCGTAGCATGGGCGTCAAACCATTCGAAGAC-CCATTCGTCCCTTTAATGTACGA 202
Query 79623 ACCGCTCGCCCGAATGTTCGAGCAGTGGATT-CCGATGCCCCCGGACCACTTGGAGATGT 79681
|| || ||||| || ||| ||| | | | || || || |||| | |||||| |
Sbjct 201 ACGACTGGCCCGGATATTCT-GCACAGAAATGCCAATTCCACCGGCACTCTTGGAAACCA 143
Query 79682 GCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCA 79741
||||||||| ||| | |||||| ||||| |||||||| ||||||||| || | | |
Sbjct 142 GCGCGCACTGCTTCAACGTCTCATAGATACCCTCGATGCTGTCGTCCTTAATCGGCATGA 83
Query 79742 GGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGT 79801
||||||||| |||||||| |||||| ||| || | |||||| ||||||||||||||||
Sbjct 82 TGAAGCAGCTGGACATCTGGGGGTTGGGCGTTCCAGAGTTGAACAGGGTCGGCGTCGCGT 23
Query 79802 GCGTGAA 79808
|||||||
Sbjct 22 GCGTGAA 16
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 538942812252480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |