Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1228585 147 2e-30 >seq1228585 Length=262 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 19196 TTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGC 19255 ||||||||||||||||||||||| |||||| | || ||| |||||| |||||||| ||| Sbjct 16 TTCACGCACGCGACGCCGACCCTGTTCAACTCTGGAACGCCCAACCCCCAGATGTCCAGC 75 Query 19256 TGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAG 19315 || ||| | || | || ||||| |||||||| ||||| ||||| |||||| | ||| || Sbjct 76 TGCTTCATCATGCCGATTAAGGACGACAGCATCGAGGGTATCTATGAGACGTTGAAGCAG 135 Query 19316 TGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGA-TCCACTGCTCGAATATCCGGTC 19374 ||||||| | |||||| | |||| || || || | | | ||| |||||||||| | Sbjct 136 TGCGCGCTGGTTTCCAAGAGTGCCGGTGGAATTGGCATTTCTGTGC-AGAATATCCGGGC 194 Query 19375 GAGTGGTACACGAATCAATGGGACGAACGG 19404 ||| || | || || |||||||| || Sbjct 195 CAGTCGTTCGTACATTAAAGGGACGAATGG 224 Score = 138 bits (152), Expect = 1e-27 Identities = 182/247 (74%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 79564 AAAACTCGGAGCATGGGCACGATGCCGT-CGGCGACGCCGTTCGTCCCGTTGATTCGTGT 79622 || ||||| ||||||||| | || | || ||| || |||||||| || || | Sbjct 260 AACACTCGTAGCATGGGCGTCAAACCATTCGAAGAC-CCATTCGTCCCTTTAATGTACGA 202 Query 79623 ACCGCTCGCCCGAATGTTCGAGCAGTGGATT-CCGATGCCCCCGGACCACTTGGAGATGT 79681 || || ||||| || ||| ||| | | | || || || |||| | |||||| | Sbjct 201 ACGACTGGCCCGGATATTCT-GCACAGAAATGCCAATTCCACCGGCACTCTTGGAAACCA 143 Query 79682 GCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCA 79741 ||||||||| ||| | |||||| ||||| |||||||| ||||||||| || | | | Sbjct 142 GCGCGCACTGCTTCAACGTCTCATAGATACCCTCGATGCTGTCGTCCTTAATCGGCATGA 83 Query 79742 GGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGT 79801 ||||||||| |||||||| |||||| ||| || | |||||| |||||||||||||||| Sbjct 82 TGAAGCAGCTGGACATCTGGGGGTTGGGCGTTCCAGAGTTGAACAGGGTCGGCGTCGCGT 23 Query 79802 GCGTGAA 79808 ||||||| Sbjct 22 GCGTGAA 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538942812252480