Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1228585 111 2e-19
seq1359195 107 2e-18
seq13652 107 2e-18
>seq1228585
Length=262
Score = 111 bits (122), Expect = 2e-19
Identities = 121/161 (75%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329
|| || |||||||| ||||| |||||||||||| |||| ||| |||| ||||||||
Sbjct 13 TATTTCACGCACGCGACGCCGACCCTGTTCAACTCTGGAACGCCCAACCCCCAGATGTCC 72
Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389
||||||||| | || |||| ||||| ||| ||||| || ||||| |||||| | |||
Sbjct 73 AGCTGCTTCATCATGCCGATTAAGGACGACAGCATCGAGGGTATCTATGAGACGTTGAAG 132
Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430
|||| || | | |||||| | | ||||| || || ||
Sbjct 133 CAGTGCGCGCTGGTTTCCAAGAGTGCCGGTGGAATTGGCAT 173
>seq1359195
Length=732
Score = 107 bits (118), Expect = 2e-18
Identities = 150/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
||||||||||||| | |||||||| ||||| ||||| || || || || |||||
Sbjct 706 GTGAAGATGTATCTCGGGCTGGCCGAGTCCTTCCCACCGCTGAGACGTGTGCCGAACTGA 647
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
|| ||||| || | |||| ||||||| |||||| || |||||||||| || | |
Sbjct 646 CCGATGGGCTGCAGCACATTGATGTTGTTGCTGCCCACAAAGTTCTGAGCCAGGTTGATA 587
Query 152149 ATCGT-GCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207
|| || | | || || | |||||||||||| ||||||| || || || | | | ||
Sbjct 586 ATTGTCGACATG-AGTGACTGTTCACCGTGGTGGTACGCCGAGTGTTCGGCCACGGAGCC 528
Query 152208 CGCCAACTGCGCCACCTTCATGTCCGTC 152235
|||||||| || || |||| ||| ||
Sbjct 527 TGCCAACTGGGCAACTTTCACCTCCCTC 500
Score = 100 bits (110), Expect = 3e-16
Identities = 144/201 (72%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
||||| ||||| | | ||| || | ||||| ||||| ||||| || ||||| ||
Sbjct 706 GTGAAGATGTATCTCGGGCTGGCCGAGTCCTTCCCACCGCTGAGACGTGTGCCGAACTGA 647
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
|| | |||| || | || | ||||||| |||||||||||| ||||||| ||||| |
Sbjct 646 CCGATGGGCTGCAGCACATTGATGTTGTTGCTGCCCACAAAGTTCTGAGCCAGGTTGATA 587
Query 117425 ATCGT--ACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGC 117482
|| || || | ||| | ||||| ||||| ||||||| || || |||||| |||
Sbjct 586 ATTGTCGACAT--GAGTGACTGTTCACCGTGGTGGTACGCCGAGTGTTCGGCCACGGAGC 529
Query 117483 CCGCCAGCTGAGCCACCTTCA 117503
| |||| ||| || || ||||
Sbjct 528 CTGCCAACTGGGCAACTTTCA 508
>seq13652
Length=6622
Score = 107 bits (118), Expect = 2e-18
Identities = 150/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
||||||||||||| | |||||||| ||||| ||||| || || || || |||||
Sbjct 2807 GTGAAGATGTATCTCGGGCTGGCCGAGTCCTTCCCACCGCTGAGACGTGTGCCGAACTGA 2748
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
|| ||||| || | |||| ||||||| |||||| || |||||||||| || | |
Sbjct 2747 CCGATGGGCTGCAGCACATTGATGTTGTTGCTGCCCACAAAGTTCTGAGCCAGGTTGATA 2688
Query 152149 ATCGT-GCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207
|| || | | || || | |||||||||||| ||||||| || || || | | | ||
Sbjct 2687 ATTGTCGACATG-AGTGACTGTTCACCGTGGTGGTACGCCGAGTGTTCGGCCACGGAGCC 2629
Query 152208 CGCCAACTGCGCCACCTTCATGTCCGTC 152235
|||||||| || || |||| ||| ||
Sbjct 2628 TGCCAACTGGGCAACTTTCACCTCCCTC 2601
Score = 100 bits (110), Expect = 3e-16
Identities = 144/201 (72%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
||||| ||||| | | ||| || | ||||| ||||| ||||| || ||||| ||
Sbjct 2807 GTGAAGATGTATCTCGGGCTGGCCGAGTCCTTCCCACCGCTGAGACGTGTGCCGAACTGA 2748
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
|| | |||| || | || | ||||||| |||||||||||| ||||||| ||||| |
Sbjct 2747 CCGATGGGCTGCAGCACATTGATGTTGTTGCTGCCCACAAAGTTCTGAGCCAGGTTGATA 2688
Query 117425 ATCGT--ACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGC 117482
|| || || | ||| | ||||| ||||| ||||||| || || |||||| |||
Sbjct 2687 ATTGTCGACAT--GAGTGACTGTTCACCGTGGTGGTACGCCGAGTGTTCGGCCACGGAGC 2630
Query 117483 CCGCCAGCTGAGCCACCTTCA 117503
| |||| ||| || || ||||
Sbjct 2629 CTGCCAACTGGGCAACTTTCA 2609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 537656875221600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |