Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq302910 141 6e-29 seq741633 116 2e-21 seq302911 84.2 1e-11 >seq302910 Length=12142 Score = 141 bits (156), Expect = 6e-29 Identities = 147/190 (77%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 34519 TTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATT 34578 ||||| ||||| |||||||| || |||| | || |||||||||||||| ||||| ||| Sbjct 11152 TTTTGTATGTTGTAATCTGAGAGAGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAGATT 11211 Query 34579 AAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTG-TTTTAACGATAA 34637 || |||||||| || ||||| | ||| || |||||| ||| ||||| ||||| | Sbjct 11212 AATCGCTGTTGATCTGGCGGTATTCCTTCTTTGTCT-TGAATTTTTGCTTTTACATTTTC 11270 Query 34638 AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAA 34697 |||||||||| ||| ||||||| ||||| ||||| || || | ||||| ||||| Sbjct 11271 AATTGTGTCTGATGGCTCAACTTCCAATGTTATTGTTTTCCCTGTCAGAGTTTTTACAAA 11330 Query 34698 AATCTGCATG 34707 |||||||||| Sbjct 11331 AATCTGCATG 11340 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 34519 TTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATT 34578 ||||| || || |||||||| || || || | ||||| |||||||| || || || || Sbjct 4322 TTTTGGATATTGTAATCTGAGAGGGTACGACCATCTTCTAGTTGTTTCCCTGCGAAGATG 4381 Query 34579 AAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA 34638 | | |||||| || || || | || || || || ||| ||||| ||||| | Sbjct 4382 AGCCTCTGTTGATCAGGTGGGATCCCTTCTTTATCCTGGAT-TTTTGCCTTAACATTTTC 4440 Query 34639 -ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAA 34697 || || ||| |||||||||| ||||| |||||||| || | ||||||||||| Sbjct 4441 TATGGTATCTGATGGTTCCACTTCCAGAGTTATTGTTTTACCAGTGAGAGTTTTCACAAA 4500 Query 34698 AATCTGCAT 34706 ||| ||||| Sbjct 4501 AATTTGCAT 4509 >seq741633 Length=11487 Score = 116 bits (128), Expect = 2e-21 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | ||| | ||||||||| |||||| || || ||||| ||||| || ||| Sbjct 11374 CCACCTCTCAAACGTAGCACCAAATGAAGAGTGGATTCTTTCTGAATATTATAGTCCGAA 11315 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | ||||| | ||||| || ||||| || | |||||||| || || || Sbjct 11314 AGTGTACGTCCATCTTCCAACTGTTTGCCTGCAAAGATGAGTCGCTGTTGATCTGGGGGA 11255 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTC-GCTCTCCA 34657 | || ||||| ||| ||| ||| | || || | ||||||||| ||| |||| Sbjct 11254 ATGCCTTCCTTATCTTGGAT-TTTCGCCTTCACATTCTCAATTGTGTCGGAAGCT-TCCA 11197 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| || || || || ||||| | || |||||||||||||||||| Sbjct 11196 CCTCCAGAGTAATGGTCTTCCCGGTAAGAGTCTTCACAAAAATCTGCATG 11147 Score = 113 bits (124), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 |||||||| ||||||||| ||||| ||||| || ||||| || || || || | || Sbjct 8852 CAACACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCAGACAGAGTGCGGCCATC 8793 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 ||| || || ||||| ||||| || | ||| || ||||| || || | ||| || ||||| Sbjct 8792 TTCCAGCTGCTTACCAGCAAAAATGAGACGTTGCTGGTCTGGTGGAATTCCTTCTTTGTC 8733 Query 34614 TGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTC-GCTCTCCACTTCCACGGTTATCG 34672 ||||||| || | | |||||||||| ||| |||||||||| || || | Sbjct 8732 CTGGATCTTTGCCTTCACATTTTCAATTGTGTCTGAAGCT-TCCACTTCCAGTGTGATGG 8674 Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || || | || || |||||||||||||| Sbjct 8673 TCTTGCCTGTGAGGGTCTTTACAAAAATCTGCAT 8640 Score = 113 bits (124), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 || ||||| ||| | ||| ||||| |||||||| ||||| || || ||||| | || Sbjct 9764 CAGCACCAGATGCAAAGTAGATTCCTTCTGAATGTTGTAATCCGACAGGGTTCGTCCATC 9705 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 ||| ||||| ||||| ||||| || | |||||| ||||| || || | || |||||||| Sbjct 9704 TTCCAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTC 9645 Query 34614 TGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTC-GCTCTCCACTTCCACGGTTATCG 34672 ||||||| || | | ||| |||||| ||| || || |||| ||| || | Sbjct 9644 CTGGATCTTTGCCTTCACATTTTCAATAGTGTCTGAAGCT-TCTACCTCCAGGGTAATTG 9586 Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || || | || ||||||||||||||||| Sbjct 9585 TCTTGCCAGTAAGGGTCTTCACAAAAATCTGCAT 9552 Score = 109 bits (120), Expect = 3e-19 Identities = 166/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| || | || ||||||||| || || || || || || || || ||||| Sbjct 9323 GCCTCCTCTGAGCCTCAGCACCAAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTGA 9264 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | || ||||||||||| || ||||| || || | ||| ||||| || || Sbjct 9263 AAGAGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTGG 9204 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCC 34656 | || ||||| ||| ||| ||||| ||| || | ||| ||||| ||| || Sbjct 9203 GATGCCTTCCTTATCT-TGAATTTTTGCTTTTACATTCTCAATAGTGTCAGATGCT-TCA 9146 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || | ||||| ||||| || || | ||||| ||||||||||||||| Sbjct 9145 ACCTCTAATGTTATGGTTTTCCCTGTAAGAGTTTTTACAAAAATCTGCATG 9095 Score = 105 bits (116), Expect = 4e-18 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | || |||||||| ||||| |||||||| ||||| |||||||| Sbjct 10462 CCACCTCTTAGCCTCAGAACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAATCTGAT 10403 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || | | ||||| | ||||| || ||||| || | |||||||| || || || Sbjct 10402 AAGGTCCTTCCATCTTCCAACTGTTTTCCTGCAAAGATGAGTCGCTGTTGATCTGGAGGA 10343 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTC-GCTCTCCA 34657 | || ||||||||| ||||||| | ||| || | ||| ||||| ||| |||| Sbjct 10342 ATGCCTTCCTTGTCTTGGATCTTT-GCTTTGACATTCTCAATGGTGTCAGAAGCT-TCCA 10285 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | |||| || || || || || || | || ||||||||||||||||| Sbjct 10284 CCTCCAGAGTAATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 10236 Score = 104 bits (114), Expect = 1e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 || ||||| ||| | |||| ||||| |||||||| |||||||| || ||||| | || Sbjct 10904 CAGCACCAGATGCAAAGTGGATTCCTTCTGAATGTTGTAATCTGACAGGGTTCGTCCATC 10845 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 ||| || || || || || || || | ||| || ||||| || || | || || ||||| Sbjct 10844 TTCCAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGAATACCTTCTTTGTC 10785 Query 34614 TGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672 | |||||| | || || | ||| |||||| ||||||||||| || || | Sbjct 10784 TTGTATCTTT-GCCTTCACATTCTCAATGGTGTCTGAAGCCTCCACTTCCAATGTAATTG 10726 Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || || | || ||||||||||||||||| Sbjct 10725 TCTTGCCTGTAAGTGTCTTCACAAAAATCTGCAT 10692 Score = 98.7 bits (108), Expect = 6e-16 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 ||||| ||| ||||| ||||| |||||||| |||||||| || || || | ||||| Sbjct 11129 CACCAGATGCAGAGTAGATTCCTTCTGAATGTTGTAATCTGACAGGGTGCGTCCATCTTC 11070 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 ||| || || || ||||| || | ||| || || || || || | || || ||||| Sbjct 11069 AAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCTGGAGGAATCCCTTCTTTGTCCTG 11010 Query 34617 GATCTTTTGTTTTAACGATAA-AATTGTGTCTT-CGCTCTCCACTTCCACGGTTATCGTT 34674 |||||| | || || | ||| ||||| ||| ||||||||||| ||| || ||| Sbjct 11009 GATCTTC-GCCTTCACATTCTCAATGGTGTCCGACGC-CTCCACTTCCAAGGTAATGGTT 10952 Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || | || ||||| || |||||||| Sbjct 10951 TTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 10920 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 || ||| ||||| | |||| ||||| |||||||| ||||| || | || | | || Sbjct 10676 CAGCACTAAATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGATAAGGTCCTTCCATC 10617 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 |||||| || || || ||||| || | |||||||||||| || || | || || || || Sbjct 10616 TTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTCTTTATC 10557 Query 34614 TGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673 | ||||| ||| | | ||||||||| ||| ||||||| || || || Sbjct 10556 TTGAATCTTAGCTTTCACATTTTCAATTGTGTCAGATGCCTCAACTTCCAATGTAATTGT 10497 Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || || | || ||||||||||| ||||| Sbjct 10496 TTTGCCAGTAAGTGTCTTCACAAAAATTTGCAT 10464 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||||||||| || ||||| |||||||| ||||| || ||||| || | ||||| Sbjct 8107 ACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGACAGTGTACGACCATCTTCG 8048 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || || || || || | | ||||||||| || || | || ||||| || Sbjct 8047 AGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGGTCTGGTGGAATACCTTCCTTATCCTGA 7988 Query 34618 ATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677 ||||| ||| | | ||| |||||| ||| ||||| | ||| || || || Sbjct 7987 ATCTTGGCTTTGACATTTTCAATGGTGTCTGATGCCTCTACTTCAAGGGTGATTGTCTTG 7928 Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | || ||||| || |||||||| Sbjct 7927 CCAGTCAGGGTCTTCACGAAGATCTGCAT 7899 >seq302911 Length=9965 Score = 84.2 bits (92), Expect = 1e-11 Identities = 134/191 (70%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 34517 CCTTT-TGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| || || || |||||||| || || || | ||||| | ||||| || ||||| Sbjct 823 CCTTTCTGTATATTGTAATCTGACAGAGTCCGTCCATCTTCCAACTGTTTCCCTGCAAAA 882 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 |||| | ||| ||||| || || | || || || || |||||| ||| | | Sbjct 883 ATTAGCCTCTGCTGGTCTGGTGGAATGCCTTCTTTATCCTGAATCTTTGCTTTGACATTT 942 Query 34636 AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACA 34695 ||||||||| ||| ||||| | ||||| ||||| || || |||||||||||| Sbjct 943 TCTATTGTGTCTGACGGCTCAACTTCTAATGTTATTGTTTTGCCAGTCAACGTTTTCACA 1002 Query 34696 AAAATCTGCAT 34706 || || ||||| Sbjct 1003 AATATTTGCAT 1013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 309369146303636