Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq302910 141 6e-29
seq741633 116 2e-21
seq302911 84.2 1e-11
>seq302910
Length=12142
Score = 141 bits (156), Expect = 6e-29
Identities = 147/190 (77%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 34519 TTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATT 34578
||||| ||||| |||||||| || |||| | || |||||||||||||| ||||| |||
Sbjct 11152 TTTTGTATGTTGTAATCTGAGAGAGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAGATT 11211
Query 34579 AAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTG-TTTTAACGATAA 34637
|| |||||||| || ||||| | ||| || |||||| ||| ||||| ||||| |
Sbjct 11212 AATCGCTGTTGATCTGGCGGTATTCCTTCTTTGTCT-TGAATTTTTGCTTTTACATTTTC 11270
Query 34638 AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAA 34697
|||||||||| ||| ||||||| ||||| ||||| || || | ||||| |||||
Sbjct 11271 AATTGTGTCTGATGGCTCAACTTCCAATGTTATTGTTTTCCCTGTCAGAGTTTTTACAAA 11330
Query 34698 AATCTGCATG 34707
||||||||||
Sbjct 11331 AATCTGCATG 11340
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 34519 TTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATT 34578
||||| || || |||||||| || || || | ||||| |||||||| || || || ||
Sbjct 4322 TTTTGGATATTGTAATCTGAGAGGGTACGACCATCTTCTAGTTGTTTCCCTGCGAAGATG 4381
Query 34579 AAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA 34638
| | |||||| || || || | || || || || ||| ||||| ||||| |
Sbjct 4382 AGCCTCTGTTGATCAGGTGGGATCCCTTCTTTATCCTGGAT-TTTTGCCTTAACATTTTC 4440
Query 34639 -ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAA 34697
|| || ||| |||||||||| ||||| |||||||| || | |||||||||||
Sbjct 4441 TATGGTATCTGATGGTTCCACTTCCAGAGTTATTGTTTTACCAGTGAGAGTTTTCACAAA 4500
Query 34698 AATCTGCAT 34706
||| |||||
Sbjct 4501 AATTTGCAT 4509
>seq741633
Length=11487
Score = 116 bits (128), Expect = 2e-21
Identities = 167/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | ||| | ||||||||| |||||| || || ||||| ||||| || |||
Sbjct 11374 CCACCTCTCAAACGTAGCACCAAATGAAGAGTGGATTCTTTCTGAATATTATAGTCCGAA 11315
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| || | ||||| | ||||| || ||||| || | |||||||| || || ||
Sbjct 11314 AGTGTACGTCCATCTTCCAACTGTTTGCCTGCAAAGATGAGTCGCTGTTGATCTGGGGGA 11255
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTC-GCTCTCCA 34657
| || ||||| ||| ||| ||| | || || | ||||||||| ||| ||||
Sbjct 11254 ATGCCTTCCTTATCTTGGAT-TTTCGCCTTCACATTCTCAATTGTGTCGGAAGCT-TCCA 11197
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| |||| || || || || ||||| | || ||||||||||||||||||
Sbjct 11196 CCTCCAGAGTAATGGTCTTCCCGGTAAGAGTCTTCACAAAAATCTGCATG 11147
Score = 113 bits (124), Expect = 3e-20
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
|||||||| ||||||||| ||||| ||||| || ||||| || || || || | ||
Sbjct 8852 CAACACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCAGACAGAGTGCGGCCATC 8793
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
||| || || ||||| ||||| || | ||| || ||||| || || | ||| || |||||
Sbjct 8792 TTCCAGCTGCTTACCAGCAAAAATGAGACGTTGCTGGTCTGGTGGAATTCCTTCTTTGTC 8733
Query 34614 TGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTC-GCTCTCCACTTCCACGGTTATCG 34672
||||||| || | | |||||||||| ||| |||||||||| || || |
Sbjct 8732 CTGGATCTTTGCCTTCACATTTTCAATTGTGTCTGAAGCT-TCCACTTCCAGTGTGATGG 8674
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || || || | || || ||||||||||||||
Sbjct 8673 TCTTGCCTGTGAGGGTCTTTACAAAAATCTGCAT 8640
Score = 113 bits (124), Expect = 3e-20
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
|| ||||| ||| | ||| ||||| |||||||| ||||| || || ||||| | ||
Sbjct 9764 CAGCACCAGATGCAAAGTAGATTCCTTCTGAATGTTGTAATCCGACAGGGTTCGTCCATC 9705
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
||| ||||| ||||| ||||| || | |||||| ||||| || || | || ||||||||
Sbjct 9704 TTCCAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTC 9645
Query 34614 TGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTC-GCTCTCCACTTCCACGGTTATCG 34672
||||||| || | | ||| |||||| ||| || || |||| ||| || |
Sbjct 9644 CTGGATCTTTGCCTTCACATTTTCAATAGTGTCTGAAGCT-TCTACCTCCAGGGTAATTG 9586
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || || || | || |||||||||||||||||
Sbjct 9585 TCTTGCCAGTAAGGGTCTTCACAAAAATCTGCAT 9552
Score = 109 bits (120), Expect = 3e-19
Identities = 166/231 (72%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| ||||| || | || ||||||||| || || || || || || || || |||||
Sbjct 9323 GCCTCCTCTGAGCCTCAGCACCAAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTGA 9264
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || | || ||||||||||| || ||||| || || | ||| ||||| || ||
Sbjct 9263 AAGAGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTGG 9204
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCC 34656
| || ||||| ||| ||| ||||| ||| || | ||| ||||| ||| ||
Sbjct 9203 GATGCCTTCCTTATCT-TGAATTTTTGCTTTTACATTCTCAATAGTGTCAGATGCT-TCA 9146
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || | ||||| ||||| || || | ||||| |||||||||||||||
Sbjct 9145 ACCTCTAATGTTATGGTTTTCCCTGTAAGAGTTTTTACAAAAATCTGCATG 9095
Score = 105 bits (116), Expect = 4e-18
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | || |||||||| ||||| |||||||| ||||| ||||||||
Sbjct 10462 CCACCTCTTAGCCTCAGAACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAATCTGAT 10403
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || | | ||||| | ||||| || ||||| || | |||||||| || || ||
Sbjct 10402 AAGGTCCTTCCATCTTCCAACTGTTTTCCTGCAAAGATGAGTCGCTGTTGATCTGGAGGA 10343
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTC-GCTCTCCA 34657
| || ||||||||| ||||||| | ||| || | ||| ||||| ||| ||||
Sbjct 10342 ATGCCTTCCTTGTCTTGGATCTTT-GCTTTGACATTCTCAATGGTGTCAGAAGCT-TCCA 10285
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| |||| || || || || || || | || |||||||||||||||||
Sbjct 10284 CCTCCAGAGTAATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 10236
Score = 104 bits (114), Expect = 1e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
|| ||||| ||| | |||| ||||| |||||||| |||||||| || ||||| | ||
Sbjct 10904 CAGCACCAGATGCAAAGTGGATTCCTTCTGAATGTTGTAATCTGACAGGGTTCGTCCATC 10845
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
||| || || || || || || || | ||| || ||||| || || | || || |||||
Sbjct 10844 TTCCAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGAATACCTTCTTTGTC 10785
Query 34614 TGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672
| |||||| | || || | ||| |||||| ||||||||||| || || |
Sbjct 10784 TTGTATCTTT-GCCTTCACATTCTCAATGGTGTCTGAAGCCTCCACTTCCAATGTAATTG 10726
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || || || | || |||||||||||||||||
Sbjct 10725 TCTTGCCTGTAAGTGTCTTCACAAAAATCTGCAT 10692
Score = 98.7 bits (108), Expect = 6e-16
Identities = 152/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
||||| ||| ||||| ||||| |||||||| |||||||| || || || | |||||
Sbjct 11129 CACCAGATGCAGAGTAGATTCCTTCTGAATGTTGTAATCTGACAGGGTGCGTCCATCTTC 11070
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
||| || || || ||||| || | ||| || || || || || | || || |||||
Sbjct 11069 AAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCTGGAGGAATCCCTTCTTTGTCCTG 11010
Query 34617 GATCTTTTGTTTTAACGATAA-AATTGTGTCTT-CGCTCTCCACTTCCACGGTTATCGTT 34674
|||||| | || || | ||| ||||| ||| ||||||||||| ||| || |||
Sbjct 11009 GATCTTC-GCCTTCACATTCTCAATGGTGTCCGACGC-CTCCACTTCCAAGGTAATGGTT 10952
Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || | || ||||| || ||||||||
Sbjct 10951 TTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 10920
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
|| ||| ||||| | |||| ||||| |||||||| ||||| || | || | | ||
Sbjct 10676 CAGCACTAAATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGATAAGGTCCTTCCATC 10617
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
|||||| || || || ||||| || | |||||||||||| || || | || || || ||
Sbjct 10616 TTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTCTTTATC 10557
Query 34614 TGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673
| ||||| ||| | | ||||||||| ||| ||||||| || || ||
Sbjct 10556 TTGAATCTTAGCTTTCACATTTTCAATTGTGTCAGATGCCTCAACTTCCAATGTAATTGT 10497
Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| || || | || ||||||||||| |||||
Sbjct 10496 TTTGCCAGTAAGTGTCTTCACAAAAATTTGCAT 10464
Score = 89.7 bits (98), Expect = 3e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
||||||||||| || ||||| |||||||| ||||| || ||||| || | |||||
Sbjct 8107 ACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGACAGTGTACGACCATCTTCG 8048
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
||||| || || || || || | | ||||||||| || || | || ||||| ||
Sbjct 8047 AGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGGTCTGGTGGAATACCTTCCTTATCCTGA 7988
Query 34618 ATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677
||||| ||| | | ||| |||||| ||| ||||| | ||| || || ||
Sbjct 7987 ATCTTGGCTTTGACATTTTCAATGGTGTCTGATGCCTCTACTTCAAGGGTGATTGTCTTG 7928
Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || | || ||||| || ||||||||
Sbjct 7927 CCAGTCAGGGTCTTCACGAAGATCTGCAT 7899
>seq302911
Length=9965
Score = 84.2 bits (92), Expect = 1e-11
Identities = 134/191 (70%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 34517 CCTTT-TGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
||||| || || || |||||||| || || || | ||||| | ||||| || |||||
Sbjct 823 CCTTTCTGTATATTGTAATCTGACAGAGTCCGTCCATCTTCCAACTGTTTCCCTGCAAAA 882
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|||| | ||| ||||| || || | || || || || |||||| ||| | |
Sbjct 883 ATTAGCCTCTGCTGGTCTGGTGGAATGCCTTCTTTATCCTGAATCTTTGCTTTGACATTT 942
Query 34636 AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACA 34695
||||||||| ||| ||||| | ||||| ||||| || || ||||||||||||
Sbjct 943 TCTATTGTGTCTGACGGCTCAACTTCTAATGTTATTGTTTTGCCAGTCAACGTTTTCACA 1002
Query 34696 AAAATCTGCAT 34706
|| || |||||
Sbjct 1003 AATATTTGCAT 1013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 309369146303636
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