Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq1236966 242 1e-59 seq516988 118 4e-22 seq1378566 95.1 5e-15 >seq1236966 Length=274 Score = 242 bits (268), Expect = 1e-59 Identities = 218/274 (80%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 29586 ACGGCGACGATCTCTCCCTGGTCCTCTGCCTCTGCATACGCCTCCGGCGCGATGCGGAAC 29645 ||||| | |||||| ||||||||||| || | ||||| || || |||||||| |||||| Sbjct 274 ACGGCCAGGATCTCGCCCTGGTCCTCGGCGACAGCATAGGCTTCAGGCGCGATCCGGAAC 215 Query 29646 TCCTCGCCGGCGTCGGCAGCGGTGTTTTCGCAGGGAACGTATCGCTGGCTCCGGCCAGAA 29705 |||||||| | |||||| |||||||| ||||| || || || ||||||| || || Sbjct 214 TCCTCGCCCGGGTCGGCCGCGGTGTTCTCGCACGGCACATACCGCTGGCGGCGCCCGTCC 155 Query 29706 CGGATGATCAGTCCGCAGCACTCGCGCGGATACTCTGCCGCAGCGTGCTTCTGCACGGCA 29765 ||||| || |||||||||||||| || || | | ||||||||| ||||||||| Sbjct 154 TTGATGACCAACCCGCAGCACTCGCGTGGGTAGACCTCGGCAGCGTGCGCCTGCACGGCC 95 Query 29766 GACAGGATGTGCTTGAGCATGGTCAGCTCCTGGCGATGATCGAGACGGCAGGGAAGCCGC 29825 | |||||||| || |||||| ||||||||||||||| | |||||||| |||||||||| Sbjct 94 GCCAGGATGTATTTCAGCATGATCAGCTCCTGGCGATCAGGGAGACGGCTGGGAAGCCGC 35 Query 29826 CGAAGGGCAGTTGGTTGCCTTCACCGAAGCGCGG 29859 || ||| || | ||||||||| ||||||||||| Sbjct 34 CGTGGGGTAGCTCGTTGCCTTCGCCGAAGCGCGG 1 >seq516988 Length=1185 Score = 118 bits (130), Expect = 4e-22 Identities = 181/252 (72%), Gaps = 17/252 (7%) Strand=Plus/Minus Query 7372 GCCACCAGCGAGAGCTGGAAGGACAAGCAGACCGGCCAGCAAC--AGGAACGCGCCGAGT 7429 ||||||| ||| ||| ||||||||| || ||| || || ||||| | | |||| Sbjct 1177 GCCACCACCGACCGCTACAAGGACAAGGCGAGCGG--AGAAATGAAGGAAGCCACGGAGT 1120 Query 7430 TCCACCGCGTGGTGTTCTTCGGTCGCCTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGG 7489 |||||| | | |||||||| ||| |||| || || |||||||| |||||| |||| Sbjct 1119 GGCACCGCATCGCCTTCTTCGGCCGCTTGGCAGAAATTGCCGGCGAATACCTGAAGAAGG 1060 Query 7490 GTTCCCAGGTCTACGTCGAAGGCAGCCTGCGCACCCGCAAGTGGCAGGCTCAGGACGGCC 7549 |||| ||||||| |||| |||| ||| || ||| ||||| || |||| |||| Sbjct 1059 GTTCGTCGGTCTACATCGAGGGCAAGCTGAAGACTCGCCAGTGGGAGA---AGGATGGCC 1003 Query 7550 AGGACCGATACACCACCGAGGTAATCGTCGACATGCACGGACAGATGCAGATGCTTGGCG 7609 || | | |||| ||||||| ||||||| || | |||||||||||||| || | Sbjct 1002 AGAAACAGTACAGCACCGAG---ATCGTCG-----CA-GACCAGATGCAGATGCTGGGAG 952 Query 7610 CCAAGCCTGGAA 7621 |||||| |||| Sbjct 951 GCAAGCC-GGAA 941 >seq1378566 Length=964 Score = 95.1 bits (104), Expect = 5e-15 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 46268 AACCATTCACGCATCTGCTGCTCTTGCCGGGCCTTCTGCCAACCTCCAGCGCGGAACATG 46327 ||||| || ||||||||| || || ||||||||||| || || || ||||||| | Sbjct 1 AACCACTCCACCATCTGCTGTTCCGCCCTCGCCTTCTGCCAGCCACCGGCCCGGAACACG 60 Query 46328 ACCTGCTCGGCCTGGCCCAGGACATAACGGCCTTGCTTGGTGAATCCAGAGGATGCCCAG 46387 |||||||||||||||||||| || || | |||| | || || | |||||| Sbjct 61 ACCTGCTCGGCCTGGCCCAGCACCAGGCGTCTGCCCTTGATAAAGCCCGTCCTGGCCCAG 120 Query 46388 AGGACGCGGATGTTCGCGTCGATCAGGTGG 46417 |||| || ||||| ||||||| ||||||| Sbjct 121 AGGAAGCCGATGTCTGCGTCGAGCAGGTGG 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191586133002824