Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_028657.1
Length=60919
Score E
Sequences producing significant alignments: (Bits) Value
seq1236966 242 1e-59
seq516988 118 4e-22
seq1378566 95.1 5e-15
>seq1236966
Length=274
Score = 242 bits (268), Expect = 1e-59
Identities = 218/274 (80%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 29586 ACGGCGACGATCTCTCCCTGGTCCTCTGCCTCTGCATACGCCTCCGGCGCGATGCGGAAC 29645
||||| | |||||| ||||||||||| || | ||||| || || |||||||| ||||||
Sbjct 274 ACGGCCAGGATCTCGCCCTGGTCCTCGGCGACAGCATAGGCTTCAGGCGCGATCCGGAAC 215
Query 29646 TCCTCGCCGGCGTCGGCAGCGGTGTTTTCGCAGGGAACGTATCGCTGGCTCCGGCCAGAA 29705
|||||||| | |||||| |||||||| ||||| || || || ||||||| || ||
Sbjct 214 TCCTCGCCCGGGTCGGCCGCGGTGTTCTCGCACGGCACATACCGCTGGCGGCGCCCGTCC 155
Query 29706 CGGATGATCAGTCCGCAGCACTCGCGCGGATACTCTGCCGCAGCGTGCTTCTGCACGGCA 29765
||||| || |||||||||||||| || || | | ||||||||| |||||||||
Sbjct 154 TTGATGACCAACCCGCAGCACTCGCGTGGGTAGACCTCGGCAGCGTGCGCCTGCACGGCC 95
Query 29766 GACAGGATGTGCTTGAGCATGGTCAGCTCCTGGCGATGATCGAGACGGCAGGGAAGCCGC 29825
| |||||||| || |||||| ||||||||||||||| | |||||||| ||||||||||
Sbjct 94 GCCAGGATGTATTTCAGCATGATCAGCTCCTGGCGATCAGGGAGACGGCTGGGAAGCCGC 35
Query 29826 CGAAGGGCAGTTGGTTGCCTTCACCGAAGCGCGG 29859
|| ||| || | ||||||||| |||||||||||
Sbjct 34 CGTGGGGTAGCTCGTTGCCTTCGCCGAAGCGCGG 1
>seq516988
Length=1185
Score = 118 bits (130), Expect = 4e-22
Identities = 181/252 (72%), Gaps = 17/252 (7%)
Strand=Plus/Minus
Query 7372 GCCACCAGCGAGAGCTGGAAGGACAAGCAGACCGGCCAGCAAC--AGGAACGCGCCGAGT 7429
||||||| ||| ||| ||||||||| || ||| || || ||||| | | ||||
Sbjct 1177 GCCACCACCGACCGCTACAAGGACAAGGCGAGCGG--AGAAATGAAGGAAGCCACGGAGT 1120
Query 7430 TCCACCGCGTGGTGTTCTTCGGTCGCCTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGG 7489
|||||| | | |||||||| ||| |||| || || |||||||| |||||| ||||
Sbjct 1119 GGCACCGCATCGCCTTCTTCGGCCGCTTGGCAGAAATTGCCGGCGAATACCTGAAGAAGG 1060
Query 7490 GTTCCCAGGTCTACGTCGAAGGCAGCCTGCGCACCCGCAAGTGGCAGGCTCAGGACGGCC 7549
|||| ||||||| |||| |||| ||| || ||| ||||| || |||| ||||
Sbjct 1059 GTTCGTCGGTCTACATCGAGGGCAAGCTGAAGACTCGCCAGTGGGAGA---AGGATGGCC 1003
Query 7550 AGGACCGATACACCACCGAGGTAATCGTCGACATGCACGGACAGATGCAGATGCTTGGCG 7609
|| | | |||| ||||||| ||||||| || | |||||||||||||| || |
Sbjct 1002 AGAAACAGTACAGCACCGAG---ATCGTCG-----CA-GACCAGATGCAGATGCTGGGAG 952
Query 7610 CCAAGCCTGGAA 7621
|||||| ||||
Sbjct 951 GCAAGCC-GGAA 941
>seq1378566
Length=964
Score = 95.1 bits (104), Expect = 5e-15
Identities = 111/150 (74%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 46268 AACCATTCACGCATCTGCTGCTCTTGCCGGGCCTTCTGCCAACCTCCAGCGCGGAACATG 46327
||||| || ||||||||| || || ||||||||||| || || || ||||||| |
Sbjct 1 AACCACTCCACCATCTGCTGTTCCGCCCTCGCCTTCTGCCAGCCACCGGCCCGGAACACG 60
Query 46328 ACCTGCTCGGCCTGGCCCAGGACATAACGGCCTTGCTTGGTGAATCCAGAGGATGCCCAG 46387
|||||||||||||||||||| || || | |||| | || || | ||||||
Sbjct 61 ACCTGCTCGGCCTGGCCCAGCACCAGGCGTCTGCCCTTGATAAAGCCCGTCCTGGCCCAG 120
Query 46388 AGGACGCGGATGTTCGCGTCGATCAGGTGG 46417
|||| || ||||| ||||||| |||||||
Sbjct 121 AGGAAGCCGATGTCTGCGTCGAGCAGGTGG 150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 191586133002824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |