Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq1199610 143 1e-29 >seq1199610 Length=229 Score = 143 bits (158), Expect = 1e-29 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 66667 GCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCCGATACCGGCGAGCAGGCCCT 66726 ||| || || || ||||| |||| ||||| ||||| ||||||||||| |||||||| Sbjct 228 GCTGGGCGTCAACGTCGACGACCTGCTGGTGTCCCAGCCGGATACCGGCGAACAGGCCCT 169 Query 66727 GGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCA--TCGTCGTCGTTGACTCC 66784 ||| ||| ||| | || || || || | ||| | || || |||| |||||| Sbjct 168 GGAAATCACCGACATGCTGGTGCGTTCCAACG--CCGTCGACGTCATCATCGTCGACTCC 111 Query 66785 GTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGC 66844 ||||| || |||||||| |||||| |||||||||| || || |||| ||||| || Sbjct 110 GTGGCCGCGCTGGTGCCCAAGGCCGAGATCGAAGGCGAGATGGGTGACATGCACGTGGGT 51 Query 66845 CTGCACGCGCGCCTCATGTCACAGGCCATGCGCAAGCTCACTGGCACCAT 66894 ||||| ||||| || ||||| ||||| |||||||| |||| |||| ||| Sbjct 50 CTGCAGGCGCGTCTGATGTCCCAGGCGCTGCGCAAGATCACCGGCAACAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238724410943928