Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq600855 102 7e-17
>seq600855
Length=4662
Score = 102 bits (112), Expect = 7e-17
Identities = 225/332 (68%), Gaps = 4/332 (1%)
Strand=Plus/Plus
Query 34394 GGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGG 34453
|| ||| | || || || || || || |||||| | |||||||| || || || || ||
Sbjct 2251 GGTGACCTTGGTCCAGTGTATGGTTTTCAGTGGCGCCACTTTGGAGCAGATTA-CGAAGG 2309
Query 34454 AGC-GAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTT 34512
| | || | ||||| ||| | || | || || || ||| | ||||| |||| |
Sbjct 2310 AACTGATTCCAACTATGAGGGCAAAGGTGTTGATCAACTTCAGCATGTGATACACACACT 2369
Query 34513 GAAGCGGAAC-CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCC 34571
| || || || ||||| | | ||| | ||||| ||||||||||| ||| |
Sbjct 2370 -ACGCACAAATCCAGATGATCGCCGCATCATCATGTGTGCGTGGAACCCACGAGATTTGG 2428
Query 34572 CTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGC 34631
|| ||||| || ||||| ||||| | | ||||| || || || ||||||||||
Sbjct 2429 GCCTTATGGCTCTGCCCCCTTGCCATTGCTTGGTACAATTTTATGTAGCAAATGGGGAGC 2488
Query 34632 TGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTG 34691
|||| |||||||| || ||| |||| | ||| ||||| | || || || || || | |
Sbjct 2489 TGTCATGCCAGCTATACCAAAGATCAGCAGATATGGGACTTGGTGTTCCATTTAATGTAG 2548
Query 34692 CTAGTTACGCTCTGCTCACGTACATGATCGCT 34723
| || || ||||| | || | |||| | |||
Sbjct 2549 CCAGCTATGCTCTATTGACATGCATGTTAGCT 2580
Score = 102 bits (112), Expect = 7e-17
Identities = 225/332 (68%), Gaps = 4/332 (1%)
Strand=Plus/Minus
Query 6622 AGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCAT 6681
||| | |||| | || | ||||| || || || | || || || || || | |||||
Sbjct 2580 AGCTAACATGCATGTCAATAGAGCATAGCTGGCTACATTAAATGGAACACCAAGTCCCAT 2521
Query 6682 GTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCA 6741
||| | |||| ||| || |||||||| |||||||||||||| || || || |||||
Sbjct 2520 ATCTGCTGATCTTTGGTATAGCTGGCATGACAGCTCCCCATTTGCTACATAAAATTGTAC 2461
Query 6742 GAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACAT 6801
| | ||||| ||||| || ||||| || | ||| ||||||||||| |||||
Sbjct 2460 CAAGCAATGGCAAGGGGGCAGAGCCATAAGGCCCAAATCTCGTGGGTTCCACGCACACAT 2401
Query 6802 CACGATCCTTCTGTCATCAGG-GTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGT 6860
| ||| | | ||||| || || || | | |||| ||||| | ||| || || |
Sbjct 2400 GATGATGCGGCGATCATCTGGATTTGTGCGT-AGTGTGTGTATCACATGCTGAAGTTGAT 2342
Query 6861 CCGCTCCCTGTCCCGAATAGTCCGCTTC-GCTCCCCCGATACTCCGCCCCAAAGTGTCTC 6919
| | || | ||| ||||| | || | ||| || || || || |||||||| | |
Sbjct 2341 CAACACCTTTGCCCTCATAGTTGGAATCAGTTCCTTCG-TAATCTGCTCCAAAGTGGCGC 2283
Query 6920 CACTGGAACCCGTAGACCGGGCCCAAGTCGCC 6951
||||| || || || || || || | ||| ||
Sbjct 2282 CACTGAAAACCATACACTGGACCAAGGTCACC 2251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440431861026240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |