Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq600855 116 3e-21 seq706859 91.5 1e-13 >seq600855 Length=4662 Score = 116 bits (128), Expect = 3e-21 Identities = 96/117 (82%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 118548 AGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCAT 118607 ||| | |||| ||||||| | | ||||||||||||||||| |||||||| || ||||| Sbjct 2580 AGCTAACATGCATGTCAATAGAGCATAGCTGGCTACATTAAATGGAACACCAAGTCCCAT 2521 Query 118608 GTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||||||||| ||||| | ||||| || |||||||| ||||| |||||||| || Sbjct 2520 ATCTGCTGATCTTTGGTATAGCTGGCATGACAGCTCCCCATTTGCTACATAAAATTG 2464 >seq706859 Length=4706 Score = 91.5 bits (100), Expect = 1e-13 Identities = 118/162 (73%), Gaps = 1/162 (1%) Strand=Plus/Minus Query 118374 AAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAGTGTGGG 118433 ||| ||||||||||| |||||||| ||||| | ||| | ||||| |||| | || Sbjct 2139 AAAGTCTTCAAACTTGAAGTCTTCAATATTGGCAACTTCCCTTTTTATTATTAGTTTAGG 2080 Query 118434 AAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGAC 118493 ||| || ||||||| | | | || | ||||| || ||||||||| |||| ||||| Sbjct 2079 AAAAGGTCGAGGCTCACGCTTTATCTGCACTTTCAATGCCTCAATGTGGTTCAAGTAGAC 2020 Query 118494 ATGAGCATCCCCAATTGTATGTATGAATTCACCAGG-TGTAA 118534 |||| || |||| || ||||| || || ||||| ||||| Sbjct 2019 ATGACTGTCTCCAAGCGTGTGTATAAACTCGCCAGGCTGTAA 1978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407417458601488