Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq741633 98.7 7e-16
seq302910 84.2 2e-11
>seq741633
Length=11487
Score = 98.7 bits (108), Expect = 7e-16
Identities = 152/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| ||||||||||| ||||||||||| || ||||| | || || ||| |
Sbjct 10236 ATGCAGATTTTTGTGAAGACTCTTACTGGCAAGACAATTACTCTGGAGGTGGAAGCTTCT 10295
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || | ||| |||||| ||| || ||||| ||||| |||| || |
Sbjct 10296 GACACCATTGAGAAT--GTCAAAGCAAAGATCCAAGACAAGGAAGGCATTCCTCCAGATC 10353
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| || || | || ||||| |||||||| ||||| || | | | | ||| || |||||||
Sbjct 10354 AACAGCGACTCATCTTTGCAGGAAAACAGTTGGAAGATGGAAGGACCTTATCAGATTACA 10413
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||||||||| || ||| ||||||||||| ||
Sbjct 10414 ACATCCAAAAGGAATCTACTCTGCATTTGGTTCTG 10448
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| ||||||||||| || ||||| || || |||||| | || || || |
Sbjct 10692 ATGCAGATTTTTGTGAAGACACTTACAGGCAAGACAATTACATTGGAAGTGGAGGCTTCA 10751
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || | ||| || || ||| ||| |||||||||||| |||| || |
Sbjct 10752 GACACCATTGAGAAT--GTGAAGGCAAAGATACAAGACAAAGAAGGTATTCCACCAGACC 10809
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
||||||| | || || || || || || |||| || | ||| | | |||| |||||||
Sbjct 10810 AGCAACGTCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGACGAACCCTGTCAGATTACA 10869
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||| || || || |||||||||| |||| || | ||||||| ||
Sbjct 10870 ACATTCAGAAGGAATCCACTTTGCATCTGGTGCTGAGGCTGCGTGGTGG 10918
Score = 82.4 bits (90), Expect = 5e-11
Identities = 159/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCA-C 27848
||||| || ||||||||||| | ||||| ||| ||||||| | || || | ||||| |
Sbjct 10008 ATGCAGATATTTGTGAAAACCTTGACTGGAAAAACTATTACATTAGAAGTAG-AAGCATC 10066
Query 27849 CG--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906
|| || || | ||| || ||| || || || |||||||| ||||| ||
Sbjct 10067 CGATACCATAGAGAAT--GTAAAAGCGAAGATCCAGGATAAAGAAGGCATTCCGCCAGAC 10124
Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966
||||| | || || ||||| ||||| || |||| || | || | |||||| |||||
Sbjct 10125 CAGCAGAGATTGATCTTTGCAGGAAAGCAGCTGGAAGATGGGCGGACCTTGTCTGATTAT 10184
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|| || || || || ||| ||||| | || || | |||||||| ||
Sbjct 10185 AATATTCAGAAGGAATCTACTCTGCATCTTGTCCTGAGGTTGCGTGGTGG 10234
>seq302910
Length=12142
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/212 (69%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--AGCA 27847
|||||||||||||| || || | || || ||| || ||| | || || ||| | ||
Sbjct 4192 ATGCAAATTTTTGTCAAGACATTAACAGGTAAAACAATAACACTGGAAGTTGAACCATCA 4133
Query 27848 CCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| || | ||| || || ||||| ||||||||||| |||| || |
Sbjct 4132 GATACTATTGAAAAT--GTGAAGGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGACC 4075
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
|||| || | |||||||| |||||||||||||| || | || | || || || ||||
Sbjct 4074 AGCAGAGGCTTATTTTTGCTGGAAAACAATTGGAAGATGGGCGTACTTTATCTGACTACA 4015
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTT 27999
| || || |||||| ||| || |||||||||
Sbjct 4014 ATATTCAGAAAGAGTCCACATTACATTTGGTT 3983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 349801375179084
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |