Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq791531 136 3e-27
>seq791531
Length=8839
Score = 136 bits (150), Expect = 3e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 4817 AATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTG 4876
||| || || || || || || |||||||| |||||||| | ||| || |||||||| ||
Sbjct 7001 AATGTATGTATCAATGAGAAGACTATACATCTCAGAATGCACATTCTCCATAGCAATTTG 6942
Query 4877 AAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAA 4936
|| || || || ||||| ||||| |||||||||||||| | || || ||||| || |
Sbjct 6941 GAAGCCATAGAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTGAACCTTTCAACCAG 6882
Query 4937 GTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA 4996
||||||||| || || || ||||| || || || || || | |||||| || || || |
Sbjct 6881 GTTTTCGTTAACAATGCCATCACTAGCAGCGAAGAAAGCTAGAACATGGGAAATGAAATG 6822
Query 4997 CTGTTCGTCAGGCTTAAG 5014
| ||| ||||| || ||
Sbjct 6821 CCTTTCTTCAGGTTTTAG 6804
Score = 109 bits (120), Expect = 5e-19
Identities = 80/93 (86%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 5042 TAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAAT 5101
|||||| ||||||||| | ||||| || |||||||| |||||||| ||||||| ||||||
Sbjct 6571 TAAATCTACTTCTTCAGCCGTCCAGAAAGACGCTTCTGCTTTTTTATACATAGCCCAAAT 6512
Query 5102 ATCAGGATACTGAATCGGAAGTATGACAAATCT 5134
|||| |||||||||| || | |||||||||||
Sbjct 6511 ATCATGATACTGAATTGGGAAAATGACAAATCT 6479
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| ||||| ||| ||||| || ||| || | || ||||||||||||||||| |||
Sbjct 7337 TCATCTCTTGAAATAAGTTCATTGCTAAATGTAAGACCTGGCATTAAACCTCTCTTCTTA 7278
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| || ||||| ||||| ||||| |||||||||||||| || || ||||| ||
Sbjct 7277 AGCCAGAAAATAGCTGCAAAACTGCCAGAGAAGAATATGCCTTCCACAGCAGCAAATGCA 7218
Query 4692 ACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCT 4751
| || || | || | | | || || |||||| | | |||||||| |||
Sbjct 7217 ATTACACGCTCTGCAAATGTGGCAGATTCATCAGCAATCCACCTGAGTGCCCAGTCAGCC 7158
Query 4752 TTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA 4789
|||||||| || || || | || | ||||| || ||
Sbjct 7157 TTTTTCTTTACACATGGCAAAGTTTCAATAGCATTGAA 7120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419776119504836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |