Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq791531 136 3e-27 >seq791531 Length=8839 Score = 136 bits (150), Expect = 3e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 4817 AATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTG 4876 ||| || || || || || || |||||||| |||||||| | ||| || |||||||| || Sbjct 7001 AATGTATGTATCAATGAGAAGACTATACATCTCAGAATGCACATTCTCCATAGCAATTTG 6942 Query 4877 AAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAA 4936 || || || || ||||| ||||| |||||||||||||| | || || ||||| || | Sbjct 6941 GAAGCCATAGAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTGAACCTTTCAACCAG 6882 Query 4937 GTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA 4996 ||||||||| || || || ||||| || || || || || | |||||| || || || | Sbjct 6881 GTTTTCGTTAACAATGCCATCACTAGCAGCGAAGAAAGCTAGAACATGGGAAATGAAATG 6822 Query 4997 CTGTTCGTCAGGCTTAAG 5014 | ||| ||||| || || Sbjct 6821 CCTTTCTTCAGGTTTTAG 6804 Score = 109 bits (120), Expect = 5e-19 Identities = 80/93 (86%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 5042 TAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAAT 5101 |||||| ||||||||| | ||||| || |||||||| |||||||| ||||||| |||||| Sbjct 6571 TAAATCTACTTCTTCAGCCGTCCAGAAAGACGCTTCTGCTTTTTTATACATAGCCCAAAT 6512 Query 5102 ATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 |||| |||||||||| || | ||||||||||| Sbjct 6511 ATCATGATACTGAATTGGGAAAATGACAAATCT 6479 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || ||||| ||| ||||| || ||| || | || ||||||||||||||||| ||| Sbjct 7337 TCATCTCTTGAAATAAGTTCATTGCTAAATGTAAGACCTGGCATTAAACCTCTCTTCTTA 7278 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| || ||||| ||||| ||||| |||||||||||||| || || ||||| || Sbjct 7277 AGCCAGAAAATAGCTGCAAAACTGCCAGAGAAGAATATGCCTTCCACAGCAGCAAATGCA 7218 Query 4692 ACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCT 4751 | || || | || | | | || || |||||| | | |||||||| ||| Sbjct 7217 ATTACACGCTCTGCAAATGTGGCAGATTCATCAGCAATCCACCTGAGTGCCCAGTCAGCC 7158 Query 4752 TTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA 4789 |||||||| || || || | || | ||||| || || Sbjct 7157 TTTTTCTTTACACATGGCAAAGTTTCAATAGCATTGAA 7120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419776119504836