Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq1309815 237 5e-58 >seq1309815 Length=454 Score = 237 bits (262), Expect = 5e-58 Identities = 260/346 (75%), Gaps = 0/346 (0%) Strand=Plus/Minus Query 33465 ACGACCTGGACATCGTCCTTCCAGACAACGCCGTTCAGGCCGTCGTAGATCGCTTTGATC 33524 || |||||||| |||||| |||||| |||||||||||||||||||||||||||||||| Sbjct 452 ACCACCTGGACGTCGTCCCGCCAGACCACGCCGTTCAGGCCGTCGTAGATCGCTTTGATG 393 Query 33525 ACGTTGTCCATATCGGGCTTCTTGGTGGGGTACAGGCCGCCGGCCAGCGCCAGCGACTTC 33584 ||||||||||| ||||||||| |||| ||| ||| |||||| | ||| | | |||| Sbjct 392 ACGTTGTCCATGTCGGGCTTCGTGGTCGGGAACACCTGGCCGGCTACGGCCTGGGCCTTC 333 Query 33585 CGCTTTTTCGACATCGATTGAGGGATGCTCAGCGCGATGTCGAGCTCGACCAGCACTGGG 33644 | |||||||||| |||| ||||||||| |||| ||| | |||||||||| ||| ||| Sbjct 332 CACTTTTTCGACTTCGACTGAGGGATGGGCAGCAGGATCTGCAGCTCGACCATCACGGGG 273 Query 33645 CCCTCGAACAGCGCGCGACCTGCCATGGCCTGCTGTCCGCTGTGCGCAATCAACCCCTCG 33704 | || ||| | || || |||||||| ||| | ||| || |||| |||||| Sbjct 272 TGCGGGATCAGGCCCCGGCCGGCCATGGCGATCTGGGCTGCGTGGGCGATCAGCCCCTCA 213 Query 33705 TAGTTCGCCGTCTTCGCCGGAGTGAACATCCTGGCGTGGGCGCCGACACGACCGATACGC 33764 ||| | |||| | | || |||||||| | ||| |||||||| | |||||||| Sbjct 212 TAGGCCACCGTTTCCTTTGGCGTGAACATGCGGGCATGGGCGCCCATCTTGCCGATACGG 153 Query 33765 GGCCTCCCCTTCCCCACCGGCTCGCCGGGTACGGTGAACATCACCG 33810 || | ||||| || | |||| ||||||||| |||| ||||| Sbjct 152 GGGCGGCCCTTGCCGATGGGCTTGCCGGGTACCACGAACTCCACCG 107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157801065019080