Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_030931.1 Length=41871 Score E Sequences producing significant alignments: (Bits) Value seq516990 95.1 3e-15 >seq516990 Length=858 Score = 95.1 bits (104), Expect = 3e-15 Identities = 179/260 (69%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 9713 TGACCGTGCCGCAGTTACTGCCGATGTCTTCGTCTGCGTAGTTGAGTTCGATG-GTTGCC 9771 ||| |||||||||||| ||| ||||||||||| ||||| ||| ||| ||| Sbjct 592 TGAACGTGCCGCAGTTGGAGCCAATGTCTTCGTCCGCGTACGTGACGGAAATGCGTTCGG 651 Query 9772 TCAGGGAACATCGAGCTCAGCTTGAGGAAGATCGGCTCAGGGAAAGACCATGCTGTTTCA 9831 || |||||| || | ||| || ||| ||| || |||||||| || || Sbjct 652 TC-GGGAACTTCTTGGAGAGCGCGATATAGACGGGCATCGGCGCCGACCATGCCGTATCG 710 Query 9832 AAGCTTGCGGACTCAGGTCCGTCAACCCTGGACT---CATAGGCATTCCACTTGGTGCCC 9888 || |||||| | | ||||| | ||| || | || || |||||| | |||||| Sbjct 711 AACTGTGCGGAGGCCTGATCGTCAGCAATGGTCTGGTCGTAAGCGTTCCACCTCGTGCCC 770 Query 9889 CAGGCCTGTCTGGCAAAGTCCATGTCGTGCAAGTAGCCGGTCTGGCGGTGATTGCGCAGC 9948 || || | | |||||||||||| |||||| |||||| ||||| || |||||| Sbjct 771 CACGCTTCCCGAGCAAAGTCCATGCTGTGCAAATAGCCGCATGCGCGGTAGTTACGCAGC 830 Query 9949 ATCTGGATGAACTGCTCGAA 9968 ||||||||||| ||||| || Sbjct 831 ATCTGGATGAATTGCTCAAA 850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131644071252232