Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq791531 150 3e-31
seq599987 129 8e-25
seq599989 102 1e-16
>seq791531
Length=8839
Score = 150 bits (166), Expect = 3e-31
Identities = 168/224 (75%), Gaps = 3/224 (1%)
Strand=Plus/Minus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
|||||||| ||| | ||| || |||||| || || ||||||| || | ||| ||
Sbjct 7337 TCATCTCTTGAAATAAGTTCATTGCTAAATGTAAGACCTGGCATTAAACCTCTCTTCTTA 7278
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
||||| || ||||| || ||| ||||| |||||||||||||| ||||| || |||||
Sbjct 7277 AGCCAGAAAATAGCTGCAAAACTGCCAGAGAAGAATATGCCTTCCACAGCAGCAAATGCA 7218
Query 46774 ACAAGTCTCTCTCCGTAACTGGCA---TCATTATGAATCCACCTTTGAGCCCAATCAGCC 46830
| | | |||| | | ||||| |||| | ||||||||| | ||||| ||||||
Sbjct 7217 ATTACACGCTCTGCAAATGTGGCAGATTCATCAGCAATCCACCTGAGTGCCCAGTCAGCC 7158
Query 46831 TTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
|||||||||||||| |||| ||||| |||||||| ||||| ||
Sbjct 7157 TTTTTCTTTACACATGGCAAAGTTTCAATAGCATTGAAGAGGAA 7114
Score = 125 bits (138), Expect = 1e-23
Identities = 104/127 (82%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175
|| |||| ||||||||||||||| |||||||| ||||| |||||||||||||||||| |
Sbjct 6576 TTCGATAAATCTACTTCTTCAGCCGTCCAGAAAGACGCTTCTGCTTTTTTATACATAGCC 6517
Query 47176 CATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGTATA 47235
|| |||||| |||| || || || ||||| |||||||| |||| || | | |||| |
Sbjct 6516 CAAATATCATGATACTGAATTGGGAAAATGACAAATCTTCTTGGGTTCTCTCTCAGTAGA 6457
Query 47236 GGTTCCA 47242
|||||||
Sbjct 6456 GGTTCCA 6450
Score = 118 bits (130), Expect = 1e-21
Identities = 143/195 (73%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 46880 TTTCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGT 46939
||||| || ||| |||| |||||||| || | |||||||||||| || ||||| | |
Sbjct 7017 TTTCAGCAGAATCCTTAATGTATGTATCAATGAGAAGACTATACATCTCAGAATGCACAT 6958
Query 46940 TTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTAC 46999
| || ||||| || || || || || ||||||||||||||||| | || || ||| ||
Sbjct 6957 TCTCCATAGCAATTTGGAAGCCATAGAAACATCTTGCTTCAGTTACTTGAACTTCTTGAC 6898
Query 47000 AAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATA 47059
|| | |||| || || || || || || |||||||||||||| || || || | |
Sbjct 6897 TGAACCTTTCAACCAGGTTTTCGTTAACAATGCCATCACTAGCAGCGAAGAAAGCTAGAA 6838
Query 47060 CATGTTTAATAAAAT 47074
|||| ||| ||||
Sbjct 6837 CATGGGAAATGAAAT 6823
>seq599987
Length=38784
Score = 129 bits (142), Expect = 8e-25
Identities = 115/144 (80%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 75445 CCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATT 75504
|||| | || |||||||| |||||| || |||| | || || || ||||| || ||
Sbjct 2112 CCATGCATAAAAATGCATTGATGTTAGCTTTCCATAATTTGGCTCAGCAATATGTATGTT 2171
Query 75505 CATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTT 75564
| |||||||| ||||| |||||||||||||||||||| |||||||| ||||| || ||
Sbjct 2172 GAGAGACTGACTCTGATCAATGAAAGCTCCTCTATCAGCTGCCATTTTGATAATTGTTTT 2231
Query 75565 TTGAGGAATTTCCCAAATAGTTTT 75588
|||||||||||||| | ||||||
Sbjct 2232 CTGAGGAATTTCCCACACAGTTTT 2255
Score = 127 bits (140), Expect = 3e-24
Identities = 167/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 76748 TTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATA 76807
||||| || |||||||| | |||||||| ||| || ||||| || | |||||| ||||
Sbjct 36365 TTATTTCCACCCTGATCCACATATCTGGAAGTATTGTTATATACACGCAACATAGGAACC 36424
Query 76808 ATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTA 76867
| || || ||||||||||| || |||| ||| ||||||||| ||||| ||| |
Sbjct 36425 AGACCATTGGATGTACCATTGGTGCCAGCAATGTAACTTCCAGCAGCACGGATA----CA 36480
Query 76868 ATAGA----TAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGT 76923
|| || ||||| || || ||||| ||| ||||| | ||||| | ||||| ||
Sbjct 36481 ATGGACGCTAAGGCCAATACCACCTGCAGATTTGGAGATCATGGCACATTGCTTCAAAGT 36540
Query 76924 GTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974
||||| || || || ||||| || ||| ||||| | || ||||||||
Sbjct 36541 ATCATAAATACCTTCAATACTGTCCTCCTTCATGCACAACAGGAAACAGCT 36591
Score = 125 bits (138), Expect = 1e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781
||||||||||||||||| || | || || || ||||| |||||||||||||| | ||
Sbjct 15439 TGAAATTCTCCAGACAAAACGCGGCGTGTATATATATTGCTGGTATATGGTTCAAAGGAC 15498
Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841
||||||||||| | ||||| ||||| || ||||| ||||| ||||||| ||| | |
Sbjct 15499 TCATTGTTTCCAAGTATTTGGGCAGTCGATGCAGTTGGCATTGGTGCCAACAAGAGAGAG 15558
Query 75842 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAT 75901
|| | | |||||| ||||| ||||| ||| |||||||||||| |
Sbjct 15559 TTGCGAACACCATGAACAGCAATTTTTTCTTTGAGAGCAGCCCAATCCCAAAGTGAAGTA 15618
Query 75902 GGTACAACATCCCAGAGATCGTATTGTAGAAT 75933
||| ||||||||| | ||| || |||| |||
Sbjct 15619 GGTTTAACATCCCACATATCATACTGTAAAAT 15650
Score = 95.1 bits (104), Expect = 2e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 75983 TCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTA 76042
|| |||||||| || || || ||||| || || || || |||||||| || |||| ||
Sbjct 16328 TCTGCTAGTTCACAGCTTGCTTCTAAAGCTCCATAGTAGATTGTTTCAAATATCTGGATA 16387
Query 76043 TTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCT 76102
|| | | ||| || || ||| ||||| ||||| | ||||||||| ||||| ||
Sbjct 16388 TTTAACTTTTGTGCCTCTTCACTCTCAAATGGATACCTCATAAGAATAAACGCATCGGCA 16447
Query 76103 AGTCCCTGAACTCCAATACCAATAGGTCTATG 76134
|| || ||||| || ||||||||||| | |||
Sbjct 16448 AGGCCTTGAACACCGATACCAATAGGACGATG 16479
>seq599989
Length=4882
Score = 102 bits (112), Expect = 1e-16
Identities = 110/143 (77%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052
|||||| || ||| | |||||||| ||||||||||| || ||||||| | |||||
Sbjct 4426 AGTTCCAGCTCCAAAGAGGGTAGGAGAAGCATGAGTGAAGTATCTTTCAGATAACAGATT 4485
Query 77053 GTATGTTTCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCA 77111
||||| | ||| | || ||||| ||| || | || || || ||||| ||||||||||
Sbjct 4486 ATATGTCTGTATAGCAGCATCTATGTCCTCACCG-TGTATGCCAACAGCTACACGCATCA 4544
Query 77112 ACATATGCTGAGGTCGTTCTACA 77134
||||||| ||||| ||||| |||
Sbjct 4545 ACATATGTTGAGGCCGTTCAACA 4567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 700480398493440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |