Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_031091.1
Length=43277
Score E
Sequences producing significant alignments: (Bits) Value
seq1291351 147 6e-31
seq217096 122 2e-23
seq1263006 102 2e-17
>seq1291351
Length=394
Score = 147 bits (162), Expect = 6e-31
Identities = 254/364 (70%), Gaps = 4/364 (1%)
Strand=Plus/Plus
Query 814 GCCCGGATCGGTTACACGAAGCTGTTGCTGGCCAACATCGGCTACAAGATCCAGCACAAG 873
|| ||| |||| | || ||| || ||| || |||| || |||||| |||| ||||||
Sbjct 33 GCGCGGGTCGGCTTTACCAAGATGCTGCACGCTAACAAGGGGTACAAGCTCCACCACAAG 92
Query 874 CGCCGCAACGTGATGATGTGGAGTCCGACCGACCCGGACGCCGAGGACATCA-GCAAGAG 932
|| |||||||| ||| | | || ||||| || ||||| || | || || | |||||
Sbjct 93 CGGCGCAACGTCCTGAGCTACTGCCCCACCGATCCTGACGCGGAAGCCAACATGAAAGAG 152
Query 933 CCACGTCAATGGCCTGATCCGCGACGTGCCGGTCATGCTGGAACTGGCGCCCTGGTTCGG 992
| | || | | || |||||||||| ||| || || ||||| |||||| ||||
Sbjct 153 C-ATGTTGAGCCCATGCTCCGCGACGTCGAGGTGCTGACCGAGCTGGCCCCCTGGATCGG 211
Query 993 TCGGAAGCACAGCGACAACACCTTGGACAACAAGGTGTTCGCGAACCGGCGCAACCTCTG 1052
||||| |||||| | || || | |||| | | ||||| | |||| |
Sbjct 212 CAAAAAGCATCGCGACAGCTCCCTGACCCGCAAGCGCCTGACCAACCG-CAAGACCTATT 270
Query 1053 GATACGCGG-CGGCAAGGCCTCTCGGAACTACCGGGAGAAGTCGCCCGACGAGGTAATCT 1111
| | | || ||||||||| || |||||||| | ||| || | || ||||| || |
Sbjct 271 GGTGCCTGGGCGGCAAGGCGGGGCGCAACTACCGCGGGAAATCTACGGATGAGGTCATTT 330
Query 1112 ACGACGAATTGTCGAAATTCGACGCCGACGTCGAGGGCGAAGGCTCGCCGACATTCCTGG 1171
||||||| |||| || ||||||||| ||||| ||||| ||||||||||||||||| |
Sbjct 331 ACGACGAGCTGTCCAAGTTCGACGCCTCGGTCGAAGGCGAGGGCTCGCCGACATTCCTCG 390
Query 1172 GTGA 1175
| ||
Sbjct 391 GCGA 394
>seq217096
Length=301
Score = 122 bits (134), Expect = 2e-23
Identities = 179/252 (71%), Gaps = 10/252 (4%)
Strand=Plus/Plus
Query 5744 CGCCGAGTACAAGTACGTCACCCTCGGCGAGCGCGGCGAACAGATCATCCTGGCCACCTA 5803
|| |||||||||| | | |||| |||| || |||||||| | ||||| || || |||||
Sbjct 58 CGGCGAGTACAAGCAGGGCACCATCGGTGACCGCGGCGAGAAAATCATTCTCGCGACCTA 117
Query 5804 CGGAGAGCTGTTCAGCATCACCCGTCAGGCGATCATCAACGACGACCTGCAGATGCTCTC 5863
||| | || |||| |||| ||||| |||||||||||||||||| || ||
Sbjct 118 CGGCAAACTCTTCA------CCCGCCAGGCCATCATCAACGACGACCTG--TCCGCCTTC 169
Query 5864 GG--ATATCCCGTTCAAGCTGGGCCAGGCTGCCAAGGCCACCATCGGCGACCTGGTCTAT 5921
|| || ||| | |||| | || || | |||| | || ||||||||||||
Sbjct 170 GGCCGCATTCCGCGCGCCATGGGTCGCGCAGCAATTCGCACCGTTGGTGACCTGGTCTAT 229
Query 5922 GCGGTTCTGACCGGTAACCCGGCGATGAGCGATGGCAAGACTCTCTTCCATGCCGACCAC 5981
|| | |||| | |||| ||| ||| ||| || ||| | || ||||| |||||||||
Sbjct 230 GCCCTGCTGAAAGCGAACCGGGCTATGTCCGACGGTAAGGCGCTGTTCCACGCCGACCAC 289
Query 5982 AGCAACCTGCTC 5993
|||||||||||
Sbjct 290 GGCAACCTGCTC 301
>seq1263006
Length=321
Score = 102 bits (112), Expect = 2e-17
Identities = 124/169 (73%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 42615 GTGTTCGACCGCCCGACCCCGTACACCCTGAACAGCCTGCGCATGGTGCCAGCCAGGAAA 42674
||||||||||| || |||||||||||||| |||| |||||| || | || |||| |||
Sbjct 95 GTGTTCGACCGGCCTACCCCGTACACCCTCGACAGTCTGCGCCTGATACCGGCCACCAAA 154
Query 42675 GACCGGCTGGAAGCGCGGGTTTGGTTCAAGGACGAAGCGGACGGTGCGCAGCCTGCATCG 42734
|| || || || ||||| ||| ||||||||||||||||| ||| ||| || ||
Sbjct 155 GAGCGCTTGAGTGCTCGGGTCTGGATCAAGGACGAAGCGGACAAGGCGTCGCCGGCCACG 214
Query 42735 GTGTGGATTGCCCCTGAGGTCTACGGTGGCCCGCGTCGGAACAAGCCGG 42783
||| | |||| ||||| | ||| ||| || ||| | |||| ||
Sbjct 215 CGCTGGCTGACCCCCGAGGTATTCGGCGGCAATCGCCGGGAAAAGCGGG 263
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 136068606049656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |