Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq1174552 86.0 2e-12 >seq1174552 Length=209 Score = 86.0 bits (94), Expect = 2e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 52122 CCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTGTAT 52181 || |||||| | || ||||| |||||||| || | ||| || ||||| ||||| Sbjct 202 CCGTGCCATGCGCTGTTCCAGTTCTATGTCGCCAATGGTCGCCTGAGCTGCCAGCTGTAT 143 Query 52182 CAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTG 52241 ||||| || |||||||| ||| | ||||| || || ||||||||||||||| | || || Sbjct 142 CAGCGTTCCGCCGACATCTTCCTCGGCGTGCCCTTCAACATTGCCAGCTATGCGCTGTTG 83 Query 52242 AC 52243 || Sbjct 82 AC 81 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 186941315534120