Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq302910 104 2e-17
seq708045 93.3 4e-14
seq302911 87.8 1e-12
seq831174 84.2 2e-11
seq741633 84.2 2e-11
>seq302910
Length=12142
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||||||||||||||| || || || || ||||| || || ||||| |||||
Sbjct 4192 ATGCAAATTTTTGTCAAGACATTAACAGGTAAAACAATAACACTGGAAGTTGAACCATCA 4133
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| || ||| | || || ||||| ||||||||||| |||| || ||
Sbjct 4132 GATACTATTGAAAATGTGAAGGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGACCAG 4073
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
|| |||||||||| ||| || ||||||||||||||| ||| | | || || |||
Sbjct 4072 CAGAGGCTTATTTTTGCTGGAAAACAATTGGAAGATGGGCGTACTTTATCTGACTACAAT 4013
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| || ||||| || ||| ||||||| || | | || || |||||
Sbjct 4012 ATTCAGAAAGAGTCCACATTACATTTGGTTCTAAGGCTTCGTGGTGG 3966
>seq708045
Length=25632
Score = 93.3 bits (102), Expect = 4e-14
Identities = 167/243 (69%), Gaps = 1/243 (0%)
Strand=Plus/Plus
Query 111084 TTATAAGAGTTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGT 111143
|||||||| | |||| |||| || ||||| || || ||||| || || || || ||| |
Sbjct 10376 TTATAAGAAATCAAAA-TGCAGATATTTGTGAAGACTTTGACGGGGAAGACTATCACCTT 10434
Query 111144 GGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGG 111203
|| ||| | ||| | ||| | || ||| ||||| || ||||||||
Sbjct 10435 AGAGGTAGAAGCTTCGGATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGG 10494
Query 111204 CGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAAC 111263
||||| ||||| || || || || | ||| ||||| || ||||||||| |||
Sbjct 10495 AATTCCCCCGGATCAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAAC 10554
Query 111264 TATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGG 111323
|| | ||||||||||| || ||||||||||| |||| | ||||| | || || ||
Sbjct 10555 ATTGTCTGATTATAATATCCAGAAAGAATCTACTTTACACCTTGTGTTAAGACTCCGTGG 10614
Query 111324 TGG 111326
|||
Sbjct 10615 TGG 10617
>seq302911
Length=9965
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158
||||||||| ||||| ||||||||||| |||||||| || || | ||| || ||
Sbjct 1014 AATGCAAATATTTGTGAAAACGTTGACTGGCAAAACAATAACATTAGAAGTTGAGCCGTC 955
Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
|| | | | | || ||| ||| ||| || ||||||||| |||| || ||
Sbjct 954 AGACACAATAGAAAATGTCAAAGCAAAGATTCAGGATAAAGAAGGCATTCCACCAGACCA 895
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
|| ||||| |||| ||| || ||||| ||||||||| ||| || | ||||| ||
Sbjct 894 GCAGAGGCTAATTTTTGCAGGGAAACAGTTGGAAGATGGACGGACTCTGTCAGATTACAA 835
Query 111279 TATACAAAAAG 111289
|||||| ||||
Sbjct 834 TATACAGAAAG 824
>seq831174
Length=18794
Score = 84.2 bits (92), Expect = 2e-11
Identities = 165/243 (68%), Gaps = 1/243 (0%)
Strand=Plus/Plus
Query 111084 TTATAAGAGTTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGT 111143
|||||||| | |||| |||| || ||||| || | ||||| || || || || ||| |
Sbjct 4096 TTATAAGAAATCAAAA-TGCAGATATTTGTGAAGAATTTGACGGGGAAGACTATCACCTT 4154
Query 111144 GGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGG 111203
|| ||| | ||| | ||| | || || ||||| || ||||||||
Sbjct 4155 AGAGGTAGAAGCTTCGGATACAATTGAAAATGTTAATGCCAAAATCCAGGATAAAGAAGG 4214
Query 111204 CGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAAC 111263
||||| ||||| || || || || | ||| ||||| || ||||||||| |||
Sbjct 4215 AATTCCCACGGATCAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAAC 4274
Query 111264 TATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGG 111323
|| | ||||||||||| || ||| ||||||| |||| | |||||| | || || ||
Sbjct 4275 ATTGTCTGATTATAATATCCAGAAATAATCTACTTTACACCTTGTGTTGAGACTCCGTGG 4334
Query 111324 TGG 111326
|||
Sbjct 4335 TGG 4337
>seq741633
Length=11487
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| |||||||| ||||| | || || |||||||| || | || ||| |
Sbjct 9096 ATGCAGATTTTTGTAAAAACTCTTACAGGGAAAACCATAACATTAGAGGTTGAAGCATCT 9155
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| || ||| | |||||| ||||||| || || |||||| | || || ||
Sbjct 9156 GACACTATTGAGAATGTAAAAGCAAAAATTCAAGATAAGGAAGGCATCCCACCTGACCAG 9215
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
|| || | |||| ||| ||||||||| | || ||| ||| | | || || |||
Sbjct 9216 CAGAGATTGATTTTTGCTGGCAAACAACTTGAGGATGGCCGCACTCTTTCAGACTACAAT 9275
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328
|| || |||||||||||||||||||| ||| || | || | || ||||
Sbjct 9276 ATCCAGAAAGAATCTACACTACATTTGGTGCTGAGGCTCAGAGGAGGCA 9324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414626939586592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |